Kalpana Raja
Kalpana Raja
Post-doctoral Research Associate, Morgridge Institute for Research @ University of Wisconsin
Verified email at morgridge.org
Cited by
Cited by
Atopic dermatitis is an IL-13–dominant disease with greater molecular heterogeneity compared to psoriasis
LC Tsoi, E Rodriguez, F Degenhardt, H Baurecht, U Wehkamp, N Volks, ...
Journal of Investigative Dermatology 139 (7), 1480-1489, 2019
An overview of the BioCreative 2012 Workshop Track III: interactive text mining task
CN Arighi, B Carterette, KB Cohen, M Krallinger, WJ Wilbur, P Fey, ...
Database 2013, 2013
PPInterFinder—a mining tool for extracting causal relations on human proteins from literature
K Raja, S Subramani, J Natarajan
Database 2013, 2013
Genetic signature to provide robust risk assessment of psoriatic arthritis development in psoriasis patients
MT Patrick, PE Stuart, K Raja, JE Gudjonsson, T Tejasvi, J Yang, ...
Nature communications 9 (1), 1-10, 2018
A review of recent advancement in integrating omics data with literature mining towards biomedical discoveries
K Raja, M Patrick, Y Gao, D Madu, Y Yang, LC Tsoi
International journal of genomics 2017, 2017
Agile text mining for the 2014 i2b2/UTHealth Cardiac risk factors challenge
J Cormack, C Nath, D Milward, K Raja, SR Jonnalagadda
Journal of biomedical informatics 58, S120-S127, 2015
Machine learning workflow to enhance predictions of Adverse Drug Reactions (ADRs) through drug-gene interactions: application to drugs for cutaneous diseases
K Raja, M Patrick, ET James, LC Tsoi
Scientific Reports 7, 2017
Classification of clinically useful sentences in clinical evidence resources
MA Morid, M Fiszman, K Raja, SR Jonnalagadda, G Del Fiol
Journal of biomedical informatics 60, 14-22, 2016
Drug repurposing prediction for immune-mediated cutaneous diseases using a word-embedding–based machine learning approach
MT Patrick, K Raja, K Miller, J Sotzen, JE Gudjonsson, JT Elder, LC Tsoi
Journal of Investigative Dermatology 139 (3), 683-691, 2019
HPIminer: A text mining system for building and visualizing human protein interaction networks and pathways
S Subramani, R Kalpana, PM Monickaraj, J Natarajan
Journal of biomedical informatics 54, 121-131, 2015
A hybrid named entity tagger for tagging human proteins/genes
K Raja, S Subramani, J Natarajan
International journal of data mining and bioinformatics 10 (3), 315-328, 2014
Hypersensitive IFN responses in lupus keratinocytes reveal key mechanistic determinants in cutaneous lupus
LC Tsoi, GA Hile, CC Berthier, MK Sarkar, TJ Reed, J Liu, R Uppala, ...
The Journal of Immunology 202 (7), 2121-2130, 2019
ProNormz–An integrated approach for human proteins and protein kinases normalization
S Subramani, K Raja, J Natarajan
Journal of biomedical informatics 47, 131-138, 2014
Classification of clinically useful sentences in MEDLINE
MA Morid, S Jonnalagadda, M Fiszman, K Raja, G Del Fiol
AMIA Annual Symposium Proceedings 2015, 2015
Natural Language Processing and Data Mining for Clinical Text.
K Raja, S Jonnalagadda
Healthcare Data Analytics 36, 219, 2015
HomoKinase: a curated database of human protein kinases
S Subramani, S Jayapalan, R Kalpana, J Natarajan
International Scholarly Research Notices 2013, 2013
In silico analysis to compare the effectiveness of assorted drugs prescribed for swine flu in diverse medicine systems
K Raja, A Prabahar, S Selvakumar, TK Raja
Indian journal of pharmaceutical sciences 76 (1), 10, 2014
Concept based Information Retrieval for Clinical Case Summaries.
J Stöber, BSE Heale, K Fulghum, G Del Fiol, H Kim, K Raja, ...
TREC, 2015
Integrative approach to reveal cell type specificity and gene candidates for psoriatic arthritis outside the MHC
MT Patrick, PE Stuart, K Raja, S Chi, Z He, JJ Voorhees, T Tejasvi, ...
Frontiers in genetics 10, 304, 2019
Mining protein phosphorylation information from biomedical literature using NLP parsing and Support Vector Machines
K Raja, J Natarajan
Computer methods and programs in biomedicine 160, 57-64, 2018
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