| Solvent accessible surface area approximations for rapid and accurate protein structure prediction E Durham, B Dorr, N Woetzel, R Staritzbichler, J Meiler Journal of molecular modeling 15, 1093-1108, 2009 | 328 | 2009 |
| bcl:: Cluster: A method for clustering biological molecules coupled with visualization in the Pymol Molecular Graphics System N Alexander, N Woetzel, J Meiler 2011 IEEE 1st international conference on computational advances in bio and …, 2011 | 153 | 2011 |
| EM-fold: de novo atomic-detail protein structure determination from medium-resolution density maps S Lindert, N Alexander, N Wötzel, M Karakaş, PL Stewart, J Meiler Structure 20 (3), 464-478, 2012 | 104 | 2012 |
| EM-fold: De novo folding of α-helical proteins guided by intermediate-resolution electron microscopy density maps S Lindert, R Staritzbichler, N Wötzel, M Karakaş, PL Stewart, J Meiler Structure 17 (7), 990-1003, 2009 | 101 | 2009 |
| Simultaneous prediction of protein secondary structure and transmembrane spans JK Leman, R Mueller, M Karakas, N Woetzel, J Meiler Proteins: Structure, Function, and Bioinformatics 81 (7), 1127-1140, 2013 | 84 | 2013 |
| A unified hydrophobicity scale for multispan membrane proteins J Koehler, N Woetzel, R Staritzbichler, CR Sanders, J Meiler Proteins: Structure, Function, and Bioinformatics 76 (1), 13-29, 2009 | 67 | 2009 |
| BCL::Fold - De Novo Prediction of Complex and Large Protein Topologies by Assembly of Secondary Structure Elements M Karakaş, N Woetzel, R Staritzbichler, N Alexander, BE Weiner, J Meiler PLoS One 7 (11), e49240, 2012 | 60 | 2012 |
| BCL:: Score—knowledge based energy potentials for ranking protein models represented by idealized secondary structure elements N Woetzel, M Karakaş, R Staritzbichler, R Müller, BE Weiner, J Meiler PloS one 7 (11), e49242, 2012 | 58 | 2012 |
| BCL:: MP-fold: folding membrane proteins through assembly of transmembrane helices BE Weiner, N Woetzel, M Karakaş, N Alexander, J Meiler Structure 21 (7), 1107-1117, 2013 | 51 | 2013 |
| BCL:: EM-Fit: rigid body fitting of atomic structures into density maps using geometric hashing and real space refinement N Woetzel, S Lindert, PL Stewart, J Meiler Journal of structural biology 175 (3), 264-276, 2011 | 45 | 2011 |
| BCL:: MP‐fold: Membrane protein structure prediction guided by EPR restraints AW Fischer, NS Alexander, N Woetzel, M Karakas, BE Weiner, J Meiler Proteins: Structure, Function, and Bioinformatics 83 (11), 1947-1962, 2015 | 42 | 2015 |
| BCL:: Fold—protein topology determination from limited NMR restraints BE Weiner, N Alexander, LR Akin, N Woetzel, M Karakas, J Meiler Proteins: Structure, Function, and Bioinformatics 82 (4), 587-595, 2014 | 31 | 2014 |
| Ab initio protein modeling into CryoEM density maps using EM‐Fold S Lindert, T Hofmann, N Wötzel, M Karakaş, PL Stewart, J Meiler Biopolymers 97 (9), 669-677, 2012 | 29 | 2012 |
| BCL:: SAXS: GPU accelerated D ebye method for computation of small angle X‐ray scattering profiles DK Putnam, BE Weiner, N Woetzel, EW Lowe Jr, J Meiler Proteins: Structure, Function, and Bioinformatics 83 (8), 1500-1512, 2015 | 18 | 2015 |
| BCL::Contact–Low Confidence Fold Recognition Hits Boost Protein Contact Prediction and De Novo Structure Determination M Karakaş, N Woetzel, J Meiler Journal of Computational Biology 17 (2), 153-168, 2010 | 13 | 2010 |
| Structure and mechanism of the phage T4 recombination mediator protein UvsY S Gajewski, MB Waddell, S Vaithiyalingam, A Nourse, Z Li, N Woetzel, ... Proceedings of the National Academy of Sciences 113 (12), 3275-3280, 2016 | 11 | 2016 |
| GPU-accelerated machine learning techniques enable QSAR modeling of large HTS data EW Lowe, M Butkiewicz, N Woetzel, J Meiler 2012 IEEE Symposium on Computational Intelligence in Bioinformatics and …, 2012 | 11 | 2012 |
| Poster: GPU-accelerated artificial neural network for QSAR modeling EW Lowe, N Woetzel, J Meiler 2011 IEEE 1st International Conference on Computational Advances in Bio and …, 2011 | 4 | 2011 |
| Poster: GPU-accelerated rigid body fitting of atomic structures into electron density maps EW Lowe, N Woetzel, J Meiler 2011 IEEE 1st International Conference on Computational Advances in Bio and …, 2011 | 2 | 2011 |
| A novel approach to de novo protein structure prediction using knowledge based energy functions and experimental restraints N Wotzel Vanderbilt University, 2011 | 1 | 2011 |
Jens MeilerVanderbilt University & University LeipzigVerified email at meilerlab.org
