The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla O Jaillon, JM Aury, B Noel, A Policriti, C Clepet, A Casagrande, ... nature 449 (7161), 463-467, 2007 | 4020 | 2007 |
The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution I Verde, AG Abbott, S Scalabrin, S Jung, S Shu, F Marroni, ... Nature genetics 45 (5), 487-494, 2013 | 1185 | 2013 |
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ... GigaScience 2 (1), 2047-217X-2-10, 2013 | 810 | 2013 |
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ... GigaScience 2 (1), 1-31, 2013 | 810 | 2013 |
Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication GA Wu, S Prochnik, J Jenkins, J Salse, U Hellsten, F Murat, X Perrier, ... Nature biotechnology 32 (7), 656-662, 2014 | 665 | 2014 |
An extensive evaluation of read trimming effects on illumina NGS data analysis C Del Fabbro, S Scalabrin, M Morgante, FM Giorgi PloS one 8 (12), e85024, 2013 | 515 | 2013 |
Correction: High throughput approaches reveal splicing of primary microRNA transcripts and tissue specific expression of mature microRNAs in Vitis vinifera E Mica, V Piccolo, M Delledonne, A Ferrarini, M Pezzotti, C Casati, ... BMC genomics 11 (1), 109, 2010 | 150* | 2010 |
Comparative study of RNA-seq-and Microarray-derived coexpression networks in Arabidopsis thaliana FM Giorgi, C Del Fabbro, F Licausi Bioinformatics 29 (6), 717-724, 2013 | 141 | 2013 |
High throughput approaches reveal splicing of primary microRNA transcripts and tissue specific expression of mature microRNAs in Vitis vinifera E Mica, V Piccolo, M Delledonne, A Ferrarini, M Pezzotti, C Casati, ... BMC genomics 10 (1), 558, 2009 | 91 | 2009 |
Grapevine field experiments reveal the contribution of genotype, the influence of environment and the effect of their interaction (G× E) on the berry transcriptome S Dal Santo, S Zenoni, M Sandri, G De Lorenzis, G Magris, E De Paoli, ... The Plant Journal 93 (6), 1143-1159, 2018 | 76 | 2018 |
rNA: a fast and accurate short reads numerical aligner F Vezzi, C Del Fabbro, AI Tomescu, A Policriti Bioinformatics 28 (1), 123-124, 2012 | 55 | 2012 |
ERNE-BS5: aligning BS-treated sequences by multiple hits on a 5-letters alphabet N Prezza, C Del Fabbro, F Vezzi, E De Paoli, A Policriti Proceedings of the ACM Conference on Bioinformatics, Computational Biology …, 2012 | 41 | 2012 |
GAM: genomic assemblies merger: a graph based method to integrate different assemblies A Casagrande, C Del Fabbro, S Scalabrin, A Policriti 2009 IEEE International Conference on Bioinformatics and Biomedicine, 321-326, 2009 | 20 | 2009 |
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species. Gigascience 2: 10 KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ... doi 10.1186/2047-217X-2-10, 2013 | 4* | 2013 |
A Parallel Algorithm for the Best k-Mismatches Alignment Problem C Del Fabbro, F Tardivo, A Policriti Parallel, Distributed and Network-Based Processing (PDP), 2014 22nd …, 2014 | 3 | 2014 |
mrNA: the MPI randomized Numerical Aligner C Del Fabbro, F Vezzi, A Policriti Bioinformatics and Biomedicine (BIBM), 2011 IEEE International Conference on …, 2011 | 2 | 2011 |
Whole genome resequencing reveals a reduced nucleotide variability in peach I Verde, F Cattonaro, S Scalabrin, E Vendramin, A Policriti, C Del Fabbro, ... Plant & Animal Genomes XIX Conference, 2011 | 2 | 2011 |
Repeated sequences in bioinformatics: assembly, annotation and alignments C Del Fabbro, A Policriti PhD thesis, University of Udine, 2010 | 2 | 2010 |
Complex history of admixture during citrus domestication revealed by genome analysis GA Wu, S Prochnik, J Jenkins, J Salse, U Hellsten, F Murat, X Perrier, ... Nature Biotechnology 32 (LBNL-7054E), 2014 | 1 | 2014 |
A catalog of molecular diversity within prunus germplasm inferred from next-generation sequencing data: bioinformatic approaches and challenges S Scalabrin, A Policriti, F Nadalin, C Del Fabbro, M Miculan, S Pinosio, ... Proceedings of the Joint Meeting AGI-SIBV-SIGA Assisi, Italy–19/22 September …, 2011 | 1 | 2011 |