| Change-O: a toolkit for analyzing large-scale B cell immunoglobulin repertoire sequencing data NT Gupta, JA Vander Heiden, M Uduman, D Gadala-Maria, G Yaari, ... Bioinformatics 31 (20), 3356-3358, 2015 | 716 | 2015 |
| pRESTO: a toolkit for processing high-throughput sequencing raw reads of lymphocyte receptor repertoires JA Vander Heiden, G Yaari, M Uduman, JNH Stern, KC O’connor, ... Bioinformatics 30 (13), 1930-1932, 2014 | 454 | 2014 |
| Personal neoantigen vaccines induce persistent memory T cell responses and epitope spreading in patients with melanoma Z Hu, DE Leet, RL Allesøe, G Oliveira, S Li, AM Luoma, J Liu, J Forman, ... Nature medicine 27 (3), 515-525, 2021 | 363 | 2021 |
| An atlas of substrate specificities for the human serine/threonine kinome JL Johnson, TM Yaron, EM Huntsman, A Kerelsky, J Song, A Regev, ... Nature 613 (7945), 759-766, 2023 | 263 | 2023 |
| Models of somatic hypermutation targeting and substitution based on synonymous mutations from high-throughput immunoglobulin sequencing data G Yaari, JA Vander Heiden, M Uduman, D Gadala-Maria, N Gupta, ... Frontiers in immunology 4, 358, 2013 | 245 | 2013 |
| Automated analysis of high-throughput B-cell sequencing data reveals a high frequency of novel immunoglobulin V gene segment alleles D Gadala-Maria, G Yaari, M Uduman, SH Kleinstein Proceedings of the National Academy of Sciences 112 (8), E862-E870, 2015 | 222 | 2015 |
| Quantifying selection in high-throughput Immunoglobulin sequencing data sets G Yaari, M Uduman, SH Kleinstein Nucleic acids research 40 (17), e134-e134, 2012 | 214 | 2012 |
| High-resolution antibody dynamics of vaccine-induced immune responses U Laserson, F Vigneault, D Gadala-Maria, G Yaari, M Uduman, ... Proceedings of the National Academy of Sciences 111 (13), 4928-4933, 2014 | 204 | 2014 |
| Angiosarcoma patients treated with immune checkpoint inhibitors: a case series of seven patients from a single institution V Florou, AE Rosenberg, E Wieder, KV Komanduri, D Kolonias, ... Journal for immunotherapy of cancer 7, 1-8, 2019 | 174 | 2019 |
| Taking advantage: high-affinity B cells in the germinal center have lower death rates, but similar rates of division, compared to low-affinity cells SM Anderson, A Khalil, M Uduman, U Hershberg, Y Louzoun, ... The Journal of Immunology 183 (11), 7314-7325, 2009 | 130 | 2009 |
| Mutation-derived neoantigens for cancer immunotherapy JC Castle, M Uduman, S Pabla, RB Stein, JS Buell Frontiers in immunology 10, 1856, 2019 | 123 | 2019 |
| Improved methods for detecting selection by mutation analysis of Ig V region sequences U Hershberg, M Uduman, MJ Shlomchik, SH Kleinstein International immunology 20 (5), 683-694, 2008 | 115 | 2008 |
| Detecting selection in immunoglobulin sequences M Uduman, G Yaari, U Hershberg, JA Stern, MJ Shlomchik, SH Kleinstein Nucleic acids research 39 (suppl_2), W499-W504, 2011 | 104 | 2011 |
| Spatiotemporal segregation of human marginal zone and memory B cell populations in lymphoid tissue Y Zhao, M Uduman, JHY Siu, TJ Tull, JD Sanderson, YCB Wu, JQ Zhou, ... Nature communications 9 (1), 3857, 2018 | 101 | 2018 |
| Cell subset prediction for blood genomic studies CR Bolen, M Uduman, SH Kleinstein BMC bioinformatics 12, 1-10, 2011 | 76 | 2011 |
| Shared VH1-46 gene usage by pemphigus vulgaris autoantibodies indicates common humoral immune responses among patients MJ Cho, ASY Lo, X Mao, AR Nagler, CT Ellebrecht, EM Mukherjee, ... Nature communications 5 (1), 4167, 2014 | 64 | 2014 |
| Influence of seasonal exposure to grass pollen on local and peripheral blood IgE repertoires in patients with allergic rhinitis YCB Wu, LK James, JA Vander Heiden, M Uduman, SR Durham, ... Journal of allergy and clinical immunology 134 (3), 604-612, 2014 | 56 | 2014 |
| A hotspot mutation in transcription factor IKZF3 drives B cell neoplasia via transcriptional dysregulation G Lazarian, S Yin, E Ten Hacken, T Sewastianik, M Uduman, A Font-Tello, ... Cancer Cell 39 (3), 380-393. e8, 2021 | 47 | 2021 |
| Integrating B cell lineage information into statistical tests for detecting selection in Ig sequences M Uduman, MJ Shlomchik, F Vigneault, GM Church, SH Kleinstein The Journal of Immunology 192 (3), 867-874, 2014 | 41 | 2014 |
| Characterization of diabetogenic CD8+ T cells: immune therapy with metabolic blockade JW Garyu, M Uduman, A Stewart, J Rui, S Deng, J Shenson, MM Staron, ... Journal of Biological Chemistry 291 (21), 11230-11240, 2016 | 35 | 2016 |
Steven H. KleinsteinProfessor, Departments of Pathology and Immunobiology, Yale School of MedicineVerified email at yale.edu
