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Alexander Shlemov
Alexander Shlemov
ex. Saint Petersburg University, Russia
Подтвержден адрес электронной почты в домене spbu.ru
Название
Процитировано
Процитировано
Год
MGnify: the microbiome analysis resource in 2020
AL Mitchell, A Almeida, M Beracochea, M Boland, J Burgin, G Cochrane, ...
Nucleic acids research 48 (D1), D570-D578, 2020
5072020
Dereplication of microbial metabolites through database search of mass spectra
H Mohimani, A Gurevich, A Shlemov, A Mikheenko, A Korobeynikov, ...
Nature communications 9 (1), 4035, 2018
2612018
Multivariate and 2D extensions of singular spectrum analysis with the Rssa package
N Golyandina, A Korobeynikov, A Shlemov, K Usevich
arXiv preprint arXiv:1309.5050, 2013
1572013
Increased diversity of peptidic natural products revealed by modification-tolerant database search of mass spectra
A Gurevich, A Mikheenko, A Shlemov, A Korobeynikov, H Mohimani, ...
Nature microbiology 3 (3), 319, 2018
902018
Variations of singular spectrum analysis for separability improvement: non-orthogonal decompositions of time series
N Golyandina, A Shlemov
arXiv preprint arXiv:1308.4022, 2013
792013
MetaMiner: a scalable peptidogenomics approach for discovery of ribosomal peptide natural products with blind modifications from microbial communities
L Cao, A Gurevich, KL Alexander, CB Naman, T Leão, E Glukhov, ...
Cell systems 9 (6), 600-608. e4, 2019
652019
Reconstructing antibody repertoires from error-prone immunosequencing reads
A Shlemov, S Bankevich, A Bzikadze, MA Turchaninova, Y Safonova, ...
The Journal of Immunology 199 (9), 3369-3380, 2017
412017
Shaped extensions of singular spectrum analysis
A Shlemov, N Golyandina
arXiv preprint arXiv:1401.4980, 2014
242014
Shaped singular spectrum analysis for quantifying gene expression, with application to the early Drosophila embryo
A Shlemov, N Golyandina, D Holloway, A Spirov
BioMed research international 2015, 2015
18*2015
PathRacer: Racing Profile HMM Paths on Assembly Graph
A Shlemov, A Korobeynikov
International Conference on Algorithms for Computational Biology, 80-94, 2019
132019
Shaped 3D singular spectrum analysis for quantifying gene expression, with application to the early zebrafish embryo
A Shlemov, N Golyandina, D Holloway, A Spirov
BioMed research international 2015, 2015
132015
Rssa: A collection of methods for singular spectrum analysis
A Korobeynikov, A Shlemov, K Usevich, N Golyandina
R package version 0.13-1, URL http://CRAN. R-project. org/package= Rssa, 2015
132015
Semi-nonparametric singular spectrum analysis with projection
N Golyandina, A Shlemov
arXiv preprint arXiv:1507.05286, 2015
122015
Rssa: A collection of methods for singular spectrum analysis, 2015
A Korobeynikov, A Shlemov, K Usevich, N Golyandina
R package version 0.13, 2016
72016
NPS: scoring and evaluating the statistical significance of peptidic natural product–spectrum matches
AM Tagirdzhanov, A Shlemov, A Gurevich
Bioinformatics 35 (14), i315-i323, 2019
62019
Two-exponential models of gene expression patterns for noisy experimental data
T Alexandrov, N Golyandina, D Holloway, A Shlemov, A Spirov
Journal of Computational Biology 25 (11), 1220-1230, 2018
62018
MetaMiner: A Scalable Peptidogenomics Approach for Discovery of Ribosomal Peptide Natural Products with Blind Modifications from Microbial Communities. Cell Systems. 2019; 9 (6 …
L Cao, A Gurevich, KL Alexander, CB Naman, T Leão, E Glukhov, ...
6
MetaRiPPquest: A Peptidogenomics Approach for the Discovery of Ribosomally Synthesized and Post-translationally Modified Peptides
H Mohimani, A Gurevich, KL Alexander, CB Naman, T Leao, E Glukhov, ...
bioRxiv, 227504, 2017
42017
Reconstructing Antibody Repertoires from Error-Prone Immunosequencing Datasets.
A Shlemov, S Bankevich, A Bzikadze, Y Safonova, PA Pevzner
RECOMB, 396-397, 2017
22017
New algorithmic challenges of adaptive immune repertoire construction
A Shlemov, S Bankevich, A Bzikadze, Y Safonova
arXiv preprint arXiv:1604.02193, 2016
22016
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Статьи 1–20