| Identification of functional elements and regulatory circuits by Drosophila modENCODE S Roy, J Ernst, PV Kharchenko, P Kheradpour, N Negre, ML Eaton, ... Science 330 (6012), 1787-1797, 2010 | 895 | 2010 |
| Comprehensive analysis of the chromatin landscape in Drosophila melanogaster PV Kharchenko, AA Alekseyenko, YB Schwartz, A Minoda, NC Riddle, ... Nature 471 (7339), 480-485, 2011 | 843 | 2011 |
| An assessment of histone-modification antibody quality TA Egelhofer, A Minoda, S Klugman, K Lee, P Kolasinska-Zwierz, ... Nature structural & molecular biology 18 (1), 91, 2011 | 382 | 2011 |
| A sequence motif within chromatin entry sites directs MSL establishment on the Drosophila X chromosome AA Alekseyenko, S Peng, E Larschan, AA Gorchakov, OK Lee, ... Cell 134 (4), 599-609, 2008 | 252 | 2008 |
| MSL complex is attracted to genes marked by H3K36 trimethylation using a sequence-independent mechanism E Larschan, AA Alekseyenko, AA Gortchakov, S Peng, B Li, P Yang, ... Molecular cell 28 (1), 121-133, 2007 | 227 | 2007 |
| Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin NC Riddle, A Minoda, PV Kharchenko, AA Alekseyenko, YB Schwartz, ... Genome research 21 (2), 147-163, 2011 | 220 | 2011 |
| Nature and function of insulator protein binding sites in the Drosophila genome YB Schwartz, D Linder-Basso, PV Kharchenko, MY Tolstorukov, M Kim, ... Genome research 22 (11), 2188-2198, 2012 | 156 | 2012 |
| Chromatin proteins captured by ChIP–mass spectrometry are linked to dosage compensation in Drosophila CI Wang, AA Alekseyenko, G LeRoy, AEH Elia, AA Gorchakov, ... Nature structural & molecular biology 20 (2), 202, 2013 | 90 | 2013 |
| Heterochromatin-associated interactions of Drosophila HP1a with dADD1, HIPP1, and repetitive RNAs AA Alekseyenko, AA Gorchakov, BM Zee, SM Fuchs, PV Kharchenko, ... Genes & development 28 (13), 1445-1460, 2014 | 72 | 2014 |
| Identification of the Drosophila interband-specific protein Z4 as a DNA-binding zinc-finger protein determining chromosomal structure H Eggert, A Gortchakov, H Saumweber Journal of cell science 117 (18), 4253-4264, 2004 | 71 | 2004 |
| Chriz, a chromodomain protein specific for the interbands of Drosophila melanogaster polytene chromosomes AA Gortchakov, H Eggert, M Gan, J Mattow, IF Zhimulev, H Saumweber Chromosoma 114 (1), 54-66, 2005 | 68 | 2005 |
| Reciprocal interactions of human C10orf12 and C17orf96 with PRC2 revealed by BioTAP-XL cross-linking and affinity purification AA Alekseyenko, AA Gorchakov, PV Kharchenko, MI Kuroda Proceedings of the National Academy of Sciences 111 (7), 2488-2493, 2014 | 64 | 2014 |
| The epigenome of evolving Drosophila neo-sex chromosomes: dosage compensation and heterochromatin formation Q Zhou, CE Ellison, VB Kaiser, AA Alekseyenko, AA Gorchakov, ... PLoS Biol 11 (11), e1001711, 2013 | 60 | 2013 |
| Conservation and de novo acquisition of dosage compensation on newly evolved sex chromosomes in Drosophila. AA Alekseyenko, CE Ellison, AA Gorchakov, Q Zhou, VB Kaiser, N Toda, ... Genes Dev. 27 (8), 853-858, 2013 | 53 | 2013 |
| Sequence-specific targeting of dosage compensation in Drosophila favors an active chromatin context AA Alekseyenko, JWK Ho, S Peng, M Gelbart, MY Tolstorukov, ... PLoS Genet 8 (4), e1002646, 2012 | 53 | 2012 |
| Long-range spreading of dosage compensation in Drosophila captures transcribed autosomal genes inserted on X AA Gorchakov, AA Alekseyenko, P Kharchenko, PJ Park, MI Kuroda Genes & development 23 (19), 2266-2271, 2009 | 42 | 2009 |
| Interaction between the Drosophila heterochromatin proteins SUUR and HP1 AV Pindyurin, LV Boldyreva, VV Shloma, TD Kolesnikova, GV Pokholkova, ... Journal of cell science 121 (10), 1693-1703, 2008 | 32 | 2008 |
| Interbands behave as decompacted autonomous units in Drosophila melanogaster polytene chromosomes VF Semeshin, SA Demakov, VV Shloma, TY Vatolina, AA Gorchakov, ... Genetica 132 (3), 267-279, 2008 | 29 | 2008 |
| Molecular and genetic organization of Drosophila melanogasterpolytene chromosomes: evidence for two types of interband regions S Demakov, A Gortchakov, Y Schwartz, V Semeshin, S Campuzano, ... Genetica 122 (3), 311-324, 2004 | 26 | 2004 |
| Sex-specific phenotypes of histone H4 point mutants establish dosage compensation as the critical function of H4K16 acetylation in Drosophila Ö Copur, A Gorchakov, K Finkl, MI Kuroda, J Müller Proceedings of the National Academy of Sciences 115 (52), 13336-13341, 2018 | 17 | 2018 |
