Protein corona formed on silver nanoparticles in blood plasma is highly selective and resistant to physicochemical changes of the solution V Gorshkov, JA Bubis, EM Solovyeva, MV Gorshkov, F Kjeldsen Environmental Science: Nano 6 (4), 1089-1098, 2019 | 68 | 2019 |
A proteomics sample metadata representation for multiomics integration and big data analysis C Dai, A Füllgrabe, J Pfeuffer, EM Solovyeva, J Deng, P Moreno, ... Nature Communications 12 (1), 5854, 2021 | 63 | 2021 |
IdentiPy: an extensible search engine for protein identification in shotgun proteomics LI Levitsky, MV Ivanov, AA Lobas, JA Bubis, IA Tarasova, EM Solovyeva, ... Journal of proteome research 17 (7), 2249-2255, 2018 | 63 | 2018 |
DirectMS1: MS/MS-free identification of 1000 proteins of cellular proteomes in 5 minutes MV Ivanov, JA Bubis, V Gorshkov, IA Tarasova, LI Levitsky, AA Lobas, ... Analytical chemistry 92 (6), 4326-4333, 2020 | 44 | 2020 |
Exome‐based proteogenomics of HEK‐293 human cell line: Coding genomic variants identified at the level of shotgun proteome AA Lobas, DS Karpov, AT Kopylov, EM Solovyeva, MV Ivanov, IY Ilina, ... Proteomics 16 (14), 1980-1991, 2016 | 33 | 2016 |
New insights into molecular changes in skeletal muscle aging and disease: Differential alternative splicing and senescence EM Solovyeva, C Ibebunjo, S Utzinger, JK Eash, A Dunbar, U Naumann, ... Mechanisms of ageing and development 197, 111510, 2021 | 28 | 2021 |
MS/MS-free protein identification in complex mixtures using multiple enzymes with complementary specificity MV Ivanov, IA Tarasova, LI Levitsky, EM Solovyeva, ML Pridatchenko, ... Journal of Proteome Research 16 (11), 3989-3999, 2017 | 23 | 2017 |
Cysteine alkylation methods in shotgun proteomics and their possible effects on methionine residues KG Kuznetsova, LI Levitsky, MA Pyatnitskiy, IY Ilina, JA Bubis, ... Journal of proteomics 231, 104022, 2021 | 19 | 2021 |
Proteogenomics of malignant melanoma cell lines: the effect of stringency of exome data filtering on variant peptide identification in shotgun proteomics AA Lobas, MA Pyatnitskiy, AL Chernobrovkin, IY Ilina, DS Karpov, ... Journal of proteome research 17 (5), 1801-1811, 2018 | 19 | 2018 |
Comparative proteomics as a tool for identifying specific alterations within interferon response pathways in human glioblastoma multiforme cells IA Tarasova, AV Tereshkova, AA Lobas, EM Solovyeva, AS Sidorenko, ... Oncotarget 9 (2), 1785, 2018 | 19 | 2018 |
DirectMS1Quant: ultrafast quantitative proteomics with MS/MS-free mass spectrometry MV Ivanov, JA Bubis, V Gorshkov, IA Tarasova, LI Levitsky, EM Solovyeva, ... Analytical Chemistry 94 (38), 13068-13075, 2022 | 18 | 2022 |
Multi-omics analysis of glioblastoma cells’ sensitivity to oncolytic viruses AV Lipatova, AV Soboleva, VA Gorshkov, JA Bubis, EM Solovyeva, ... Cancers 13 (21), 5268, 2021 | 17 | 2021 |
Depletion of human serum albumin in embryo culture media for in vitro fertilization using monolithic columns with immobilized antibodies IA Tarasova, AA Lobas, U Černigoj, EM Solovyeva, B Mahlberg, ... Electrophoresis 37 (17-18), 2322-2327, 2016 | 17 | 2016 |
FractionOptimizer: a method for optimal peptide fractionation in bottom-up proteomics EM Solovyeva, AA Lobas, AT Kopylov, IY Ilina, LI Levitsky, ... Analytical and bioanalytical chemistry 410, 3827-3833, 2018 | 16 | 2018 |
Modification of cysteine residues for mass spectrometry-based proteomic analysis: facts and artifacts KG Kuznetsova, EM Solovyeva, AV Kuzikov, MV Gorshkov, ... Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry 14, 204-215, 2020 | 14 | 2020 |
Proteomics‐based scoring of cellular response to stimuli for improved characterization of signaling pathway activity EM Kazakova, EM Solovyeva, LI Levitsky, JA Bubis, DD Emekeeva, ... Proteomics 23 (5), 2200275, 2023 | 10 | 2023 |
Semi-supervised quality control method for proteome analyses based on tandem mass spectrometry EM Solovyeva, AA Lobas, AT Kopylov, MV Gorshkov International Journal of Mass Spectrometry 427, 59-64, 2018 | 10 | 2018 |
Massive proteogenomic reanalysis of publicly available proteomic datasets of human tissues in search for protein recoding via adenosine-to-inosine RNA editing LI Levitsky, MV Ivanov, AO Goncharov, AA Kliuchnikova, JA Bubis, ... Journal of Proteome Research 22 (6), 1695-1711, 2023 | 8 | 2023 |
New insectotoxin from Tibellus oblongus spider venom presents novel adaptation of ICK fold Y Korolkova, E Maleeva, A Mikov, A Lobas, E Solovyeva, M Gorshkov, ... Toxins 13 (1), 29, 2021 | 8 | 2021 |
Method for identification of threonine isoforms in peptides by ultraviolet photofragmentation of cold ions EM Solovyeva, VN Kopysov, AY Pereverzev, AA Lobas, SA Moshkovskii, ... Analytical chemistry 91 (10), 6709-6715, 2019 | 8 | 2019 |