Protein corona formed on silver nanoparticles in blood plasma is highly selective and resistant to physicochemical changes of the solution V Gorshkov, JA Bubis, EM Solovyeva, MV Gorshkov, F Kjeldsen Environmental Science: Nano 6 (4), 1089-1098, 2019 | 60 | 2019 |
IdentiPy: an extensible search engine for protein identification in shotgun proteomics LI Levitsky, MV Ivanov, AA Lobas, JA Bubis, IA Tarasova, EM Solovyeva, ... Journal of proteome research 17 (7), 2249-2255, 2018 | 60 | 2018 |
A proteomics sample metadata representation for multiomics integration and big data analysis C Dai, A Füllgrabe, J Pfeuffer, EM Solovyeva, J Deng, P Moreno, ... Nature Communications 12 (1), 5854, 2021 | 43 | 2021 |
DirectMS1: MS/MS-free identification of 1000 proteins of cellular proteomes in 5 minutes MV Ivanov, JA Bubis, V Gorshkov, IA Tarasova, LI Levitsky, AA Lobas, ... Analytical chemistry 92 (6), 4326-4333, 2020 | 33 | 2020 |
Exome‐based proteogenomics of HEK‐293 human cell line: Coding genomic variants identified at the level of shotgun proteome AA Lobas, DS Karpov, AT Kopylov, EM Solovyeva, MV Ivanov, IY Ilina, ... Proteomics 16 (14), 1980-1991, 2016 | 33 | 2016 |
New insights into molecular changes in skeletal muscle aging and disease: Differential alternative splicing and senescence EM Solovyeva, C Ibebunjo, S Utzinger, JK Eash, A Dunbar, U Naumann, ... Mechanisms of Ageing and Development 197, 111510, 2021 | 25 | 2021 |
Proteogenomics of malignant melanoma cell lines: the effect of stringency of exome data filtering on variant peptide identification in shotgun proteomics AA Lobas, MA Pyatnitskiy, AL Chernobrovkin, IY Ilina, DS Karpov, ... Journal of proteome research 17 (5), 1801-1811, 2018 | 20 | 2018 |
Comparative proteomics as a tool for identifying specific alterations within interferon response pathways in human glioblastoma multiforme cells IA Tarasova, AV Tereshkova, AA Lobas, EM Solovyeva, AS Sidorenko, ... Oncotarget 9 (2), 1785, 2018 | 19 | 2018 |
MS/MS-free protein identification in complex mixtures using multiple enzymes with complementary specificity MV Ivanov, IA Tarasova, LI Levitsky, EM Solovyeva, ML Pridatchenko, ... Journal of Proteome Research 16 (11), 3989-3999, 2017 | 19 | 2017 |
FractionOptimizer: a method for optimal peptide fractionation in bottom-up proteomics EM Solovyeva, AA Lobas, AT Kopylov, IY Ilina, LI Levitsky, ... Analytical and bioanalytical chemistry 410, 3827-3833, 2018 | 16 | 2018 |
Cysteine alkylation methods in shotgun proteomics and their possible effects on methionine residues KG Kuznetsova, LI Levitsky, MA Pyatnitskiy, IY Ilina, JA Bubis, ... Journal of proteomics 231, 104022, 2021 | 15 | 2021 |
Depletion of human serum albumin in embryo culture media for in vitro fertilization using monolithic columns with immobilized antibodies IA Tarasova, AA Lobas, U Černigoj, EM Solovyeva, B Mahlberg, ... Electrophoresis 37 (17-18), 2322-2327, 2016 | 15 | 2016 |
Multi-omics analysis of glioblastoma cells’ sensitivity to oncolytic viruses AV Lipatova, AV Soboleva, VA Gorshkov, JA Bubis, EM Solovyeva, ... Cancers 13 (21), 5268, 2021 | 12 | 2021 |
Modification of cysteine residues for mass spectrometry-based proteomic analysis: facts and artifacts KG Kuznetsova, EM Solovyeva, AV Kuzikov, MV Gorshkov, ... Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry 14, 204-215, 2020 | 11 | 2020 |
Semi-supervised quality control method for proteome analyses based on tandem mass spectrometry EM Solovyeva, AA Lobas, AT Kopylov, MV Gorshkov International Journal of Mass Spectrometry 427, 59-64, 2018 | 10 | 2018 |
Method for identification of threonine isoforms in peptides by ultraviolet photofragmentation of cold ions EM Solovyeva, VN Kopysov, AY Pereverzev, AA Lobas, SA Moshkovskii, ... Analytical chemistry 91 (10), 6709-6715, 2019 | 8 | 2019 |
DirectMS1Quant: ultrafast quantitative proteomics with MS/MS-free mass spectrometry MV Ivanov, JA Bubis, V Gorshkov, IA Tarasova, LI Levitsky, EM Solovyeva, ... Analytical chemistry 94 (38), 13068-13075, 2022 | 7 | 2022 |
Proteomics‐based scoring of cellular response to stimuli for improved characterization of signaling pathway activity EM Kazakova, EM Solovyeva, LI Levitsky, JA Bubis, DD Emekeeva, ... Proteomics 23 (5), 2200275, 2023 | 5 | 2023 |
New insectotoxin from Tibellus oblongus spider venom presents novel adaptation of ICK fold Y Korolkova, E Maleeva, A Mikov, A Lobas, E Solovyeva, M Gorshkov, ... Toxins 13 (1), 29, 2021 | 5 | 2021 |
Ultraviolet photodissociation of peptides: New insight on the mobile proton model EM Solovyeva, AY Pereverzev, MV Gorshkov, OV Boyarkin Journal of Experimental and Theoretical Physics 130, 626-632, 2020 | 5 | 2020 |