| Detection of a SARS-CoV-2 variant of concern in South Africa H Tegally, E Wilkinson, M Giovanetti, A Iranzadeh, V Fonseca, ... Nature 592 (7854), 438-443, 2021 | 2620* | 2021 |
| Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa R Viana, S Moyo, DG Amoako, H Tegally, C Scheepers, CL Althaus, ... Nature 603 (7902), 679-686, 2022 | 1410 | 2022 |
| Escape of SARS-CoV-2 501Y. V2 from neutralization by convalescent plasma S Cele, I Gazy, L Jackson, SH Hwa, H Tegally, G Lustig, J Giandhari, ... Nature 593 (7857), 142-146, 2021 | 707* | 2021 |
| Emergence of SARS-CoV-2 omicron lineages BA. 4 and BA. 5 in South Africa H Tegally, M Moir, J Everatt, M Giovanetti, C Scheepers, E Wilkinson, ... Nature medicine 28 (9), 1785-1790, 2022 | 604* | 2022 |
| Renewing Felsenstein’s phylogenetic bootstrap in the era of big data F Lemoine, JB Domelevo Entfellner, E Wilkinson, D Correia, ... Nature 556 (7702), 452-456, 2018 | 527 | 2018 |
| Sixteen novel lineages of SARS-CoV-2 in South Africa H Tegally, E Wilkinson, RJ Lessells, J Giandhari, S Pillay, N Msomi, ... Nature medicine 27 (3), 440-446, 2021 | 388 | 2021 |
| The emergence and ongoing convergent evolution of the SARS-CoV-2 N501Y lineages DP Martin, S Weaver, H Tegally, JE San, SD Shank, E Wilkinson, ... Cell 184 (20), 5189-5200. e7, 2021 | 251 | 2021 |
| Urgent need for a non-discriminatory and non-stigmatizing nomenclature for monkeypox virus C Happi, I Adetifa, P Mbala, R Njouom, E Nakoune, A Happi, N Ndodo, ... PLoS biology 20 (8), e3001769, 2022 | 197 | 2022 |
| A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa E Wilkinson, M Giovanetti, H Tegally, JE San, R Lessells, D Cuadros, ... Science 374 (6566), 423-431, 2021 | 186 | 2021 |
| SARS-CoV-2 prolonged infection during advanced HIV disease evolves extensive immune escape S Cele, F Karim, G Lustig, JE San, T Hermanus, H Tegally, J Snyman, ... Cell host & microbe 30 (2), 154-162. e5, 2022 | 166 | 2022 |
| Emergence of a SARS-CoV-2 variant of concern with mutations in spike glycoprotein H Tegally, E Wilkinson, M Giovanetti, A Iranzadeh, V Fonseca, ... Nature 592 (7854), 438-443, 2021 | 146 | 2021 |
| Tracking the 2022 monkeypox outbreak with epidemiological data in real-time MUG Kraemer, H Tegally, DM Pigott, A Dasgupta, J Sheldon, E Wilkinson, ... The Lancet Infectious Diseases 22 (7), 941-942, 2022 | 123 | 2022 |
| Early transmission of SARS-CoV-2 in South Africa: An epidemiological and phylogenetic report J Giandhari, S Pillay, E Wilkinson, H Tegally, I Sinayskiy, M Schuld, ... International Journal of Infectious Diseases 103, 234-241, 2021 | 105 | 2021 |
| Persistent SARS-CoV-2 infection and intra-host evolution in association with advanced HIV infection F Karim, MYS Moosa, BI Gosnell, S Cele, J Giandhari, S Pillay, H Tegally, ... MedRxiv, 2021.06. 03.21258228, 2021 | 98 | 2021 |
| The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance H Tegally, JE San, M Cotten, M Moir, B Tegomoh, G Mboowa, DP Martin, ... Science 378 (6615), eabq5358, 2022 | 88 | 2022 |
| Whole genome sequencing of SARS-CoV-2: adapting Illumina protocols for quick and accurate outbreak investigation during a pandemic S Pillay, J Giandhari, H Tegally, E Wilkinson, B Chimukangara, R Lessells, ... Genes 11 (8), 949, 2020 | 85 | 2020 |
| HIV-1 and SARS-CoV-2: Patterns in the evolution of two pandemic pathogens W Fischer, EE Giorgi, S Chakraborty, K Nguyen, T Bhattacharya, J Theiler, ... Cell host & microbe 29 (7), 1093-1110, 2021 | 83 | 2021 |
| Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable C Mavian, SK Pond, S Marini, BR Magalis, AM Vandamme, S Dellicour, ... Proceedings of the National Academy of Sciences 117 (23), 12522-12523, 2020 | 82 | 2020 |
| Next generation sequencing and bioinformatics analysis of family genetic inheritance AM Kanzi, JE San, B Chimukangara, E Wilkinson, M Fish, V Ramsuran, ... Frontiers in Genetics 11, 544162, 2020 | 76 | 2020 |
| Selection analysis identifies clusters of unusual mutational changes in Omicron lineage BA. 1 that likely impact Spike function DP Martin, S Lytras, AG Lucaci, W Maier, B Grüning, SD Shank, S Weaver, ... Molecular Biology and Evolution 39 (4), msac061, 2022 | 67 | 2022 |
Tulio de OliveiraStellenbosch UniversityVerified email at sun.ac.za
