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Joaquim Aguirre-Plans
Joaquim Aguirre-Plans
Postdoctoral Research Associate, Northeastern University
Verified email at northeastern.edu
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Cited by
Year
In-silico drug repurposing study predicts the combination of pirfenidone and melatonin as a promising candidate therapy to reduce SARS-CoV-2 infection progression and …
L Artigas, M Coma, P Matos-Filipe, J Aguirre-Plans, J Farrés, R Valls, ...
PloS one 15 (10), e0240149, 2020
352020
Proximal pathway enrichment analysis for targeting comorbid diseases via network endopharmacology
J Aguirre-Plans, J Piñero, J Menche, F Sanz, LI Furlong, HHHW Schmidt, ...
Pharmaceuticals 11 (3), 61, 2018
302018
In-silico simulated prototype-patients using TPMS technology to study a potential adverse effect of sacubitril and valsartan
G Jorba, J Aguirre-Plans, V Junet, C Segú-Vergés, JL Ruiz, A Pujol, ...
PLoS One 15 (2), e0228926, 2020
222020
GUILDify v2. 0: a tool to identify molecular networks underlying human diseases, their comorbidities and their druggable targets
J Aguirre-Plans, J Piñero, F Sanz, LI Furlong, N Fernandez-Fuentes, ...
Journal of molecular biology 431 (13), 2477-2484, 2019
192019
On the mechanisms of protein interactions: predicting their affinity from unbound tertiary structures
MA Marín-López, J Planas-Iglesias, J Aguirre-Plans, J Bonet, ...
Bioinformatics 34 (4), 592-598, 2018
132018
Modeling SARS‐CoV‐2 proteins in the CASP‐commons experiment
A Kryshtafovych, J Moult, WM Billings, D Della Corte, K Fidelis, S Kwon, ...
Proteins: Structure, Function, and Bioinformatics 89 (12), 1987-1996, 2021
72021
An ensemble learning approach for modeling the systems biology of drug-induced injury
J Aguirre-Plans, J Piñero, T Souza, G Callegaro, SJ Kunnen, F Sanz, ...
Biology direct 16 (1), 1-14, 2021
62021
SPServer: split-statistical potentials for the analysis of protein structures and protein–protein interactions
J Aguirre-Plans, A Meseguer, R Molina-Fernandez, MA Marín-López, ...
BMC bioinformatics 22 (1), 1-13, 2021
62021
Using collections of structural models to predict changes of binding affinity caused by mutations in protein–protein interactions
A Meseguer, L Dominguez, PM Bota, J Aguirre‐Plans, J Bonet, ...
Protein Science 29 (10), 2112-2130, 2020
62020
Δ9-tetrahydrocannabinol modulates the proteasome system in the brain
V Salgado-Mendialdúa, J Aguirre-Plans, E Guney, R Reig-Viader, ...
Biochemical Pharmacology 157, 159-168, 2018
62018
Network, transcriptomic and genomic features differentiate genes relevant for drug response
J Piñero, A Gonzalez-Perez, E Guney, J Aguirre-Plans, F Sanz, B Oliva, ...
Frontiers in genetics 9, 412, 2018
62018
Galaxy InteractoMIX: An Integrated Computational Platform for the Study of Protein–Protein Interaction Data
P Mirela-Bota, J Aguirre-Plans, A Meseguer, C Galletti, J Segura, ...
Journal of molecular biology 433 (11), 166656, 2021
42021
ModCRE: a structure homology-modeling approach to predict TF binding in cis-regulatory elements
O Fornes, A Meseguer, J Aguirre-Plans, P GOHL, P Mireia-Bota, ...
bioRxiv, 2022
2022
In silico tools to study diseases and polypharmacology through the lens of network medicine
J Aguirre Plans
2021
Prediction of adverse drug reaction linked to protein targets using network-based information and machine-learning
C Galletti, J Aguirre-Plans, B Oliva, N Fernandez-Fuentes
Frontiers in Bioinformatics, 70, 0
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Articles 1–15