| Eight high-quality genomes reveal pan-genome architecture and ecotype differentiation of Brassica napus JM Song, Z Guan, J Hu, C Guo, Z Yang, S Wang, D Liu, B Wang, S Lu, ... Nature Plants 6 (1), 34-45, 2020 | 524 | 2020 |
| Extensive sequence divergence between the reference genomes of two elite indica rice varieties Zhenshan 97 and Minghui 63 J Zhang, LL Chen, F Xing, DA Kudrna, W Yao, D Copetti, T Mu, W Li, ... Proceedings of the National Academy of Sciences 113 (35), E5163-E5171, 2016 | 221 | 2016 |
| Identification and analysis of adenine N6-methylation sites in the rice genome C Zhou, C Wang, H Liu, Q Zhou, Q Liu, Y Guo, T Peng, J Song, J Zhang, ... Nature plants 4 (8), 554-563, 2018 | 172 | 2018 |
| Two gap-free reference genomes and a global view of the centromere architecture in rice JM Song, WZ Xie, S Wang, YX Guo, DH Koo, D Kudrna, C Gong, Y Huang, ... Molecular Plant 14 (10), 1757-1767, 2021 | 149 | 2021 |
| Patterns of genome-wide allele-specific expression in hybrid rice and the implications on the genetic basis of heterosis L Shao, F Xing, C Xu, Q Zhang, J Che, X Wang, J Song, X Li, J Xiao, ... Proceedings of the National Academy of Sciences 116 (12), 5653-5658, 2019 | 131 | 2019 |
| Contributions of Zea mays subspecies mexicana haplotypes to modern maize N Yang, XW Xu, RR Wang, WL Peng, L Cai, JM Song, W Li, X Luo, L Niu, ... Nature communications 8 (1), 1874, 2017 | 118 | 2017 |
| The genome of jojoba (Simmondsia chinensis): A taxonomically isolated species that directs wax ester accumulation in its seeds D Sturtevant, S Lu, ZW Zhou, Y Shen, S Wang, JM Song, J Zhong, ... Science advances 6 (11), eaay3240, 2020 | 70 | 2020 |
| BnPIR: Brassica napus pan‐genome information resource for 1689 accessions JM Song, DX Liu, WZ Xie, Z Yang, L Guo, K Liu, QY Yang, LL Chen Plant Biotechnology Journal 19 (3), 412, 2021 | 66 | 2021 |
| High-quality reference genome sequences of two coconut cultivars provide insights into evolution of monocot chromosomes and differentiation of fiber content and plant height S Wang, Y Xiao, ZW Zhou, J Yuan, H Guo, Z Yang, J Yang, P Sun, L Sun, ... Genome biology 22, 1-25, 2021 | 50 | 2021 |
| Long‐read sequencing reveals widespread intragenic structural variants in a recent allopolyploid crop plant HS Chawla, HT Lee, I Gabur, P Vollrath, S Tamilselvan‐Nattar‐Amutha, ... Plant biotechnology journal 19 (2), 240-250, 2021 | 42 | 2021 |
| Genome structural evolution in Brassica crops Z He, R Ji, L Havlickova, L Wang, Y Li, HT Lee, J Song, C Koh, J Yang, ... Nature Plants 7 (6), 757-765, 2021 | 35 | 2021 |
| Rice information GateWay: a comprehensive bioinformatics platform for Indica Rice genomes JM Song, Y Lei, CC Shu, Y Ding, F Xing, H Liu, J Wang, W Xie, J Zhang, ... Molecular Plant 11 (3), 505-507, 2018 | 34 | 2018 |
| Building two indica rice reference genomes with PacBio long-read and Illumina paired-end sequencing data J Zhang, LL Chen, S Sun, D Kudrna, D Copetti, W Li, T Mu, WB Jiao, ... Scientific data 3 (1), 1-8, 2016 | 33 | 2016 |
| Development of whole-genome agarose-resolvable LInDel markers in rice W Hu, T Zhou, P Wang, B Wang, J Song, Z Han, L Chen, K Liu, Y Xing Rice 13, 1-11, 2020 | 29 | 2020 |
| Analysis of rice transcriptome reveals the lncRNA/circRNA regulation in tissue development R Zhou, P Sanz-Jimenez, XT Zhu, JW Feng, L Shao, JM Song, LL Chen Rice 14, 1-16, 2021 | 24 | 2021 |
| Analyzing AbrB-Knockout Effects through Genome and Transcriptome Sequencing of Bacillus licheniformis DW2 CC Shu, D Wang, J Guo, JM Song, SW Chen, LL Chen, JX Gao Frontiers in Microbiology 9, 307, 2018 | 24 | 2018 |
| Prediction and characterization of protein-protein interaction network in Bacillus licheniformis WX-02 YC Han, JM Song, L Wang, CC Shu, J Guo, LL Chen Scientific reports 6 (1), 19486, 2016 | 19 | 2016 |
| Oil plant genomes: current state of the science JM Song, Y Zhang, ZW Zhou, S Lu, W Ma, C Lu, LL Chen, L Guo Journal of experimental botany 73 (9), 2859-2874, 2022 | 18 | 2022 |
| Comprehensive transcriptome and improved genome annotation of Bacillus licheniformis WX-02 J Guo, G Cheng, XY Gou, F Xing, S Li, YC Han, L Wang, JM Song, ... FEBS letters 589 (18), 2372-2381, 2015 | 18 | 2015 |
| Graph-based pan-genomes: increased opportunities in plant genomics S Wang, YQ Qian, RP Zhao, LL Chen, JM Song Journal of Experimental Botany 74 (1), 24-39, 2023 | 16 | 2023 |
