Accurate prediction of protein structures and interactions using a three-track neural network M Baek, F DiMaio, I Anishchenko, J Dauparas, S Ovchinnikov, GR Lee, ... Science 373 (6557), 871-876, 2021 | 809 | 2021 |
Improved protein structure prediction using predicted interresidue orientations J Yang, I Anishchenko, H Park, Z Peng, S Ovchinnikov, D Baker Proceedings of the National Academy of Sciences 117 (3), 1496-1503, 2020 | 704 | 2020 |
Assessing the utility of coevolution-based residue–residue contact predictions in a sequence-and structure-rich era H Kamisetty, S Ovchinnikov, D Baker Proceedings of the National Academy of Sciences 110 (39), 15674-15679, 2013 | 594 | 2013 |
Robust and accurate prediction of residue–residue interactions across protein interfaces using evolutionary information S Ovchinnikov, H Kamisetty, D Baker elife 3, e02030, 2014 | 547 | 2014 |
Protein structure determination using metagenome sequence data S Ovchinnikov, H Park, N Varghese, PS Huang, GA Pavlopoulos, DE Kim, ... Science 355 (6322), 294-298, 2017 | 435 | 2017 |
ColabFold: making protein folding accessible to all M Mirdita, K Schütze, Y Moriwaki, L Heo, S Ovchinnikov, M Steinegger Nature Methods, 1-4, 2022 | 309 | 2022 |
Large-scale determination of previously unsolved protein structures using evolutionary information S Ovchinnikov, L Kinch, H Park, Y Liao, J Pei, DE Kim, H Kamisetty, ... elife 4, e09248, 2015 | 238 | 2015 |
Macromolecular modeling and design in Rosetta: recent methods and frameworks JK Leman, BD Weitzner, SM Lewis, J Adolf-Bryfogle, N Alam, RF Alford, ... Nature methods 17 (7), 665-680, 2020 | 206 | 2020 |
De novo design of a fluorescence-activating β-barrel J Dou, AA Vorobieva, W Sheffler, LA Doyle, H Park, MJ Bick, B Mao, ... Nature 561 (7724), 485-491, 2018 | 204 | 2018 |
Another mechanism for the insulator-metal transition observed in Mott insulators AG Gavriliuk, VV Struzhkin, IS Lyubutin, SG Ovchinnikov, MY Hu, P Chow Physical Review B 77 (15), 155112, 2008 | 185 | 2008 |
Architectures of lipid transport systems for the bacterial outer membrane DC Ekiert, G Bhabha, GL Isom, G Greenan, S Ovchinnikov, IR Henderson, ... Cell 169 (2), 273-285. e17, 2017 | 167 | 2017 |
Hubbard operators in the theory of strongly correlated electrons SG Ovchinnikov, VV Val'kov World Scientific, 2004 | 156 | 2004 |
Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3 S Schoebel, W Mi, A Stein, S Ovchinnikov, R Pavlovicz, F DiMaio, D Baker, ... Nature 548 (7667), 352-355, 2017 | 146 | 2017 |
Protein interaction networks revealed by proteome coevolution Q Cong, I Anishchenko, S Ovchinnikov, D Baker Science 365 (6449), 185-189, 2019 | 143 | 2019 |
Specific features of spin, charge, and orbital ordering in cobaltites BI Natal'ya, SG Ovchinnikov, MM Korshunov, ME Il'ya, VK Natal'ya Physics-Uspekhi 52 (8), 789, 2009 | 134 | 2009 |
Origins of coevolution between residues distant in protein 3D structures I Anishchenko, S Ovchinnikov, H Kamisetty, D Baker Proceedings of the National Academy of Sciences 114 (34), 9122-9127, 2017 | 126 | 2017 |
Magnetic properties of trigonal GdFe3 (BO3) 4 AD Balaev, LN Bezmaternykh, IA Gudim, VL Temerov, SG Ovchinnikov, ... Journal of magnetism and magnetic materials 258, 532-534, 2003 | 125 | 2003 |
The band structure of strong-correlated electrons in La2− xSrxCuO4 and YBa2Cu3O7− y SG Ovchinnikov, IS Sandalov Physica C: Superconductivity 161 (5-6), 607-617, 1989 | 125 | 1989 |
Structure of a bd oxidase indicates similar mechanisms for membrane-integrated oxygen reductases S Safarian, C Rajendran, H Müller, J Preu, JD Langer, S Ovchinnikov, ... Science 352 (6285), 583-586, 2016 | 119 | 2016 |
Improved de novo structure prediction in CASP 11 by incorporating coevolution information into Rosetta S Ovchinnikov, DE Kim, RYR Wang, Y Liu, F DiMaio, D Baker Proteins: Structure, Function, and Bioinformatics 84, 67-75, 2016 | 116 | 2016 |