Othman Soufan
Othman Soufan
Assistant Professor of Computer Science, St. Francis Xavier University
Verified email at stfx.ca - Homepage
Title
Cited by
Cited by
Year
MetaboAnalyst 4.0: towards more transparent and integrative metabolomics analysis
J Chong, O Soufan, C Li, I Caraus, S Li, G Bourque, DS Wishart, J Xia
Nucleic acids research 46 (W1), W486-W494, 2018
20852018
NetworkAnalyst 3.0: a visual analytics platform for comprehensive gene expression profiling and meta-analysis
G Zhou, O Soufan, J Ewald, REW Hancock, N Basu, J Xia
Nucleic acids research 47 (W1), W234-W241, 2019
3652019
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
MP Menden, D Wang, MJ Mason, B Szalai, KC Bulusu, Y Guan, T Yu, ...
Nature communications 10 (1), 2674, 2019
1122019
DWFS: A Wrapper Feature Selection Tool Based on a Parallel Genetic Algorithm
O Soufan, D Kleftogiannis, P Kalnis, VB Bajic
PLOS ONE, 2015
1052015
miRNet 2.0: network-based visual analytics for miRNA functional analysis and systems biology
L Chang, G Zhou, O Soufan, J Xia
Nucleic acids research 48 (W1), W244-W251, 2020
672020
DASPfind: new efficient method to predict drug–target interactions
W Ba-Alawi, O Soufan, M Essack, P Kalnis, VB Bajic
Journal of cheminformatics 8 (1), 1-9, 2016
612016
DPubChem: a web tool for QSAR modeling and high-throughput virtual screening
O Soufan, W Ba-Alawi, A Magana-Mora, M Essack, VB Bajic
Scientific reports 8 (1), 1-10, 2018
202018
Mining chemical activity status from high-throughput screening assays
O Soufan, W Ba-Alawi, M Afeef, M Essack, V Rodionov, P Kalnis, VB Bajic
PloS one 10 (12), e0144426, 2015
192015
DRABAL: novel method to mine large high-throughput screening assays using Bayesian active learning
O Soufan, W Ba-Alawi, M Afeef, M Essack, P Kalnis, VB Bajic
Journal of cheminformatics 8 (1), 1-14, 2016
142016
Transcriptome and physiological analysis reveal alterations in muscle metabolisms and immune responses of grass carp (Ctenopharyngodon idellus) cultured at different stocking …
H Zhao, O Soufan, J Xia, R Tang, L Li, D Li
Aquaculture 503, 186-197, 2019
132019
DANNP: an efficient artificial neural network pruning tool
M Alshahrani, O Soufan, A Magana-Mora, VB Bajic
PeerJ Computer Science 3, e137, 2017
112017
Systematic selection of chemical fingerprint features improves the Gibbs energy prediction of biochemical reactions
M Alazmi, H Kuwahara, O Soufan, L Ding, X Gao
Bioinformatics 35 (15), 2634-2643, 2019
72019
T1000: a reduced gene set prioritized for toxicogenomic studies
O Soufan, J Ewald, C Viau, D Crump, M Hecker, N Basu, J Xia
PeerJ 7, e7975, 2019
42019
Arrhythmia Detection using Mutual Information-Based Integration Method
O Soufan, S Arafat
World Conf. Soft Computing, 2011
4*2011
EcoToxModules: custom gene sets to organize and analyze toxicogenomics data from ecological species
JD Ewald, O Soufan, D Crump, M Hecker, J Xia, N Basu
Environmental science & technology 54 (7), 4376-4387, 2020
32020
Computational intelligence for cardiac arrhythmia classification
SA Bellegdi, S Mohandes, OM Soufan, S Arafat
UKCI 2011, 93-97, 2011
32011
Arrhythmia Detection using Mutual Information-Based Integration»
OM Soufan, S Arafat
WConSC 2011 conference, At San Francisco, CA 94132, 2011
22011
Novel Data Mining Methods for Virtual Screening of Biological Active Chemical Compounds
O Soufan
12016
An Empirical Study of Wrappers for Feature Subset Selection based on a Parallel Genetic Algorithm: The Multi-Wrapper Model
O Soufan
King Abdullah University of Science and Technology, 2012
12012
FDMine: a graph mining approach to predict and evaluate food-drug interactions
MM Rahman, SM Vadrev, A Magana-Mora, J Levman, O Soufan
2021
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Articles 1–20