| HIV Infection Linked to Injection Use of Oxymorphone in Indiana, 2014-2015 New England Journal of Medicine 375 (3), 229-239, 2016 | 579 | 2016 |
| Digital epidemiology M Salathe, L Bengtsson, TJ Bodnar, DD Brewer, JS Brownstein, C Buckee, ... Public Library of Science 8 (7), e1002616, 2012 | 531 | 2012 |
| Opioid use fueling HIV transmission in an urban setting: an outbreak of HIV infection among people who inject drugs—Massachusetts, 2015–2018 C Alpren, EL Dawson, B John, K Cranston, N Panneer, HD Fukuda, ... American journal of public health 110 (1), 37-44, 2020 | 158 | 2020 |
| Notes from the field: HIV diagnoses among persons who inject drugs—Northeastern Massachusetts, 2015–2018 K Cranston, C Alpren, B John, E Dawson, K Roosevelt, A Burrage, ... Morbidity and Mortality Weekly Report 68 (10), 253, 2019 | 150 | 2019 |
| Identifying clusters of recent and rapid HIV transmission through analysis of molecular surveillance data AM Oster, AM France, N Panneer, MCB Ocfemia, E Campbell, ... Journal of acquired immune deficiency syndromes (1999) 79 (5), 543, 2018 | 124 | 2018 |
| Detailed transmission network analysis of a large opiate-driven outbreak of HIV infection in the United States EM Campbell, H Jia, A Shankar, D Hanson, W Luo, S Masciotra, ... The Journal of infectious diseases 216 (9), 1053-1062, 2017 | 105 | 2017 |
| Complex social contagion makes networks more vulnerable to disease outbreaks E Campbell, M Salathé Scientific reports 3 (1), 1905, 2013 | 87 | 2013 |
| Participation in fraternity and sorority activities and the spread of COVID-19 among residential university communities—Arkansas, August 21–September 5, 2020 KE Vang, ER Krow-Lucal, AE James, MJ Cima, A Kothari, N Zohoori, ... Morbidity and Mortality Weekly Report 70 (1), 20, 2021 | 53 | 2021 |
| Multidisciplinary community-based investigation of a COVID-19 outbreak among Marshallese and Hispanic/Latino communities—Benton and Washington counties, Arkansas, March–June 2020 KE Center, J Da Silva, AL Hernandez, K Vang, DW Martin, J Mazurek, ... Morbidity and Mortality Weekly Report 69 (48), 1807, 2020 | 42 | 2020 |
| Notes from the field: outbreak of human immunodeficiency virus infection among persons who inject drugs—Cabell County, West Virginia, 2018–2019 A Atkins, RP McClung, M Kilkenny, K Bernstein, K Willenburg, A Edwards, ... Morbidity and Mortality Weekly Report 69 (16), 499, 2020 | 37 | 2020 |
| Accurate assembly of minority viral haplotypes from next-generation sequencing through efficient noise reduction S Knyazev, V Tsyvina, A Shankar, A Melnyk, A Artyomenko, T Malygina, ... Nucleic acids research 49 (17), e102-e102, 2021 | 33 | 2021 |
| Cliquesnv: Scalable reconstruction of intra-host viral populations from ngs reads S Knyazev, V Tsyvina, A Melnyk, A Artyomenko, T Malygina, YB Porozov, ... BioRxiv, 264242, 2018 | 26 | 2018 |
| MicrobeTrace: Retooling molecular epidemiology for rapid public health response EM Campbell, A Boyles, A Shankar, J Kim, S Knyazev, R Cintron, ... PLoS computational biology 17 (9), e1009300, 2021 | 25 | 2021 |
| Increasing HIV-1 subtype diversity in seven states, United States, 2006–2013 AM Oster, WM Switzer, AL Hernandez, N Saduvala, JO Wertheim, ... Annals of epidemiology 27 (4), 244-251. e1, 2017 | 25 | 2017 |
| Natural selection favoring more transmissible HIV detected in United States molecular transmission network JO Wertheim, AM Oster, WM Switzer, C Zhang, N Panneer, E Campbell, ... Nature communications 10 (1), 5788, 2019 | 22 | 2019 |
| A population model evaluating the consequences of the evolution of double-resistance and tradeoffs on the benefits of two-drug antibiotic treatments EM Campbell, L Chao PloS one 9 (1), e86971, 2014 | 17 | 2014 |
| Increasing capacity to detect clusters of rapid HIV transmission in varied populations—United States AM Oster, N Panneer, SB Lyss, RP McClung, M Watson, N Saduvala, ... Viruses 13 (4), 577, 2021 | 13 | 2021 |
| Phylodynamic analysis complements partner services by identifying acute and unreported HIV transmission EM Campbell, A Patala, A Shankar, JF Li, JA Johnson, E Westheimer, ... Viruses 12 (2), 145, 2020 | 13 | 2020 |
| CliqueSNV: an efficient noise reduction technique for accurate assembly of viral variants from NGS data S Knyazev, V Tsyvina, A Shankar, A Melnyk, A Artyomenko, T Malygina, ... bioRxiv 264242, 2020 | 9 | 2020 |
| Human immunodeficiency virus (HIV) outbreak investigation among persons who inject drugs in Massachusetts enhanced by HIV sequence data M Tumpney, B John, N Panneer, RP McClung, EM Campbell, K Roosevelt, ... The Journal of Infectious Diseases 222 (Supplement_5), S259-S267, 2020 | 8 | 2020 |
Joan Marie DuwveAssociate Dean, Richard M. Fairbanks School of Public HealthVerified email at indy.rr.com
