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Alexander Herbig
Alexander Herbig
Group Leader, Computational Pathogenomics, Department of Archaeogenetics, Max Planck Institute for the Science of Human History, Jena, Germany
Verified email at shh.mpg.de
Title
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Cited by
Year
Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis
KI Bos, KM Harkins, A Herbig, M Coscolla, N Weber, I Comas, SA Forrest, ...
Nature 514 (7523), 494-497, 2014
5542014
Genome-wide comparison of medieval and modern Mycobacterium leprae
VJ Schuenemann, P Singh, TA Mendum, B Krause-Kyora, G Jäger, KI Bos, ...
Science 341 (6142), 179-183, 2013
3502013
EAGER: efficient ancient genome reconstruction
A Peltzer, G Jäger, A Herbig, A Seitz, C Kniep, J Krause, K Nieselt
Genome biology 17 (1), 1-14, 2016
3052016
High-Resolution Transcriptome Maps Reveal Strain-Specific Regulatory Features of Multiple Campylobacter jejuni Isolates
G Dugar, A Herbig, KU Förstner, N Heidrich, R Reinhardt, K Nieselt, ...
PLoS genetics 9 (5), e1003495, 2013
3052013
Global transcriptional start site mapping using differential RNA sequencing reveals novel antisense RNAs in Escherichia coli
MK Thomason, T Bischler, SK Eisenbart, KU Förstner, A Zhang, A Herbig, ...
Journal of bacteriology 197 (1), 18-28, 2015
2622015
The 5300-year-old Helicobacter pylori genome of the Iceman
F Maixner, B Krause-Kyora, D Turaev, A Herbig, MR Hoopmann, ...
Science 351 (6269), 162-165, 2016
2172016
Salmonella enterica genomes from victims of a major sixteenth-century epidemic in Mexico
ÅJ Vågene, A Herbig, MG Campana, NM Robles García, C Warinner, ...
Nature ecology & evolution 2 (3), 520-528, 2018
2112018
Historical Y. pestis genomes reveal the European Black Death as the source of ancient and modern plague pandemics
MA Spyrou, RI Tukhbatova, M Feldman, J Drath, S Kacki, JB de Heredia, ...
Cell Host & Microbe 19 (6), 874-881, 2016
2082016
The dynamic architecture of the metabolic switch in Streptomyces coelicolor
K Nieselt, F Battke, A Herbig, P Bruheim, A Wentzel, ØM Jakobsen, ...
BMC genomics 11 (1), 1-9, 2010
1872010
Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus
KI Bos, A Herbig, J Sahl, N Waglechner, M Fourment, SA Forrest, J Klunk, ...
Elife 5, 2016
1702016
Insight into the evolution and origin of leprosy bacilli from the genome sequence of Mycobacterium lepromatosis
P Singh, A Benjak, VJ Schuenemann, A Herbig, C Avanzi, P Busso, ...
Proceedings of the National Academy of Sciences 112 (14), 4459-4464, 2015
1612015
Analysis of 3800-year-old Yersinia pestis genomes suggests Bronze Age origin for bubonic plague
MA Spyrou, RI Tukhbatova, CC Wang, AA Valtueña, AK Lankapalli, ...
Nature communications 9 (1), 1-10, 2018
1482018
A High-Coverage Yersinia pestis Genome from a Sixth-Century Justinianic Plague Victim
M Feldman, M Harbeck, M Keller, MA Spyrou, A Rott, B Trautmann, ...
Molecular biology and evolution 33 (11), 2911-2923, 2016
1452016
A robust framework for microbial archaeology
C Warinner, A Herbig, A Mann, JA Fellows Yates, CL Weiß, HA Burbano, ...
Annual review of genomics and human genetics 18, 321-356, 2017
1392017
Ancient pathogen genomics as an emerging tool for infectious disease research
MA Spyrou, KI Bos, A Herbig, J Krause
Nature Reviews Genetics 20 (6), 323-340, 2019
1352019
Origin of modern syphilis and emergence of a pandemic Treponema pallidum cluster
N Arora, VJ Schuenemann, G Jäger, A Peltzer, A Seitz, A Herbig, ...
Nature microbiology 2 (1), 1-6, 2016
1312016
Phylogeography of the second plague pandemic revealed through analysis of historical Yersinia pestis genomes
MA Spyrou, M Keller, RI Tukhbatova, CL Scheib, EA Nelson, ...
Nature communications 10 (1), 1-13, 2019
1122019
Ancient Yersinia pestis genomes from across Western Europe reveal early diversification during the First Pandemic (541750)
M Keller, MA Spyrou, CL Scheib, GU Neumann, A Kröpelin, ...
Proceedings of the National Academy of Sciences 116 (25), 12363-12372, 2019
1122019
Ancient genomes reveal a high diversity of Mycobacterium leprae in medieval Europe
VJ Schuenemann, C Avanzi, B Krause-Kyora, A Seitz, A Herbig, S Inskip, ...
PLoS pathogens 14 (5), e1006997, 2018
1112018
Mining metagenomic data sets for ancient DNA: recommended protocols for authentication
FM Key, C Posth, J Krause, A Herbig, KI Bos
Trends in Genetics 33 (8), 508-520, 2017
1032017
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