MAURICIO CARABALLO
MAURICIO CARABALLO
Подтвержден адрес электронной почты в домене ucsd.edu
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Процитировано
Год
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
34662019
Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking
MX Wang, JJ Carver, VV Phelan, LM Sanchez, N Garg, Y Peng, ...
Nature Biotechnology 34, 828–837 (2016) doi:10.1038/nbt.3597 34, 828-837, 2016
15732016
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ...
PeerJ Preprints, 2018
6772018
Feature-based molecular networking in the GNPS analysis environment
LF Nothias, D Petras, R Schmid, K Dührkop, J Rainer, A Sarvepalli, ...
Nature methods 17 (9), 905-908, 2020
1782020
Propagating annotations of molecular networks using in silico fragmentation
RR da Silva, M Wang, LF Nothias, JJJ van der Hooft, ...
PLoS computational biology 14 (4), e1006089, 2018
1202018
Reproducible molecular networking of untargeted mass spectrometry data using GNPS
AT Aron, EC Gentry, KL McPhail, LF Nothias, M Nothias-Esposito, ...
Nature protocols 15 (6), 1954-1991, 2020
952020
MolNetEnhancer: Enhanced molecular networks by integrating metabolome mining and annotation tools
M Ernst, KB Kang, AM Caraballo-Rodríguez, LF Nothias, J Wandy, ...
Metabolites 9 (7), 144, 2019
942019
Chemical signaling involved in plant–microbe interactions
FO Chagas, R de Cassia Pessotti, AM Caraballo-Rodriguez, MT Pupo
Chemical Society Reviews 47 (5), 1652-1704, 2018
942018
Mass spectrometry searches using MASST
M Wang, AK Jarmusch, F Vargas, AA Aksenov, JM Gauglitz, K Weldon, ...
Nature biotechnology 38 (1), 23-26, 2020
612020
The extracellular matrix protects Bacillus subtilis colonies from Pseudomonas invasion and modulates plant co-colonization
C Molina-Santiago, JR Pearson, Y Navarro, MV Berlanga-Clavero, ...
Nature communications 10 (1), 1-15, 2019
542019
Natural products as mediators of disease
N Garg, T Luzzatto-Knaan, AV Melnik, AM Caraballo-Rodríguez, ...
Natural product reports 34 (2), 194-219, 2017
532017
A convolutional neural network-based approach for the rapid annotation of molecularly diverse natural products
R Reher, HW Kim, C Zhang, HH Mao, M Wang, LF Nothias, ...
Journal of the American Chemical Society 142 (9), 4114-4120, 2020
502020
Endophytic Actinobacteria from the Brazilian Medicinal Plant Lychnophora ericoides Mart. and the Biological Potential of Their Secondary Metabolites
R Conti, FO Chagas, AM Caraballo‐Rodriguez, WGP Melo, ...
Chemistry & biodiversity 13 (6), 727-736, 2016
342016
Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages
JM Gauglitz, CM Aceves, AA Aksenov, G Aleti, J Almaliti, A Bouslimani, ...
Food chemistry 302, 125290, 2020
272020
ReDU: a framework to find and reanalyze public mass spectrometry data
AK Jarmusch, M Wang, CM Aceves, RS Advani, S Aguirre, AA Aksenov, ...
Nature methods 17 (9), 901-904, 2020
242020
QIIME 2: reproducible, interactive, scalable, and extensible microbiome data science. PeerJ Preprints 6: e27295v2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ...
222018
Molecular inter-kingdom interactions of endophytes isolated from Lychnophora ericoides
AM Caraballo-Rodríguez, PC Dorrestein, MT Pupo
Scientific reports 7 (1), 1-14, 2017
182017
Expanding the Chemical Repertoire of the Endophyte Streptomyces albospinus RLe7 Reveals Amphotericin B as an Inducer of a Fungal Phenotype
FO Chagas, AM Caraballo-Rodríguez, PC Dorrestein, MT Pupo
Journal of natural products 80 (5), 1302-1309, 2017
172017
Wildlife-microbiome interactions and disease: exploring opportunities for disease mitigation across ecological scales
CL Williams, AM Caraballo-Rodríguez, C Allaband, A Zarrinpar, R Knight, ...
Drug Discovery Today: Disease Models 28, 105-115, 2018
112018
Repository-scale co-and re-analysis of tandem mass spectrometry data
AK Jarmusch, M Wang, CM Aceves, RS Advani, S Aguire, AA Aksenov, ...
bioRxiv, 750471, 2019
102019
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