Follow
Shahira Abousamra
Shahira Abousamra
Verified email at stonybrook.edu
Title
Cited by
Cited by
Year
Localization in the crowd with topological constraints
S Abousamra, M Hoai, D Samaras, C Chen
Proceedings of the AAAI Conference on Artificial Intelligence 35 (2), 872-881, 2021
1172021
Utilizing automated breast cancer detection to identify spatial distributions of tumor-infiltrating lymphocytes in invasive breast cancer
H Le, R Gupta, L Hou, S Abousamra, D Fassler, L Torre-Healy, RA Moffitt, ...
The American journal of pathology 190 (7), 1491-1504, 2020
962020
Deep learning-based image analysis methods for brightfield-acquired multiplex immunohistochemistry images
DJ Fassler, S Abousamra, R Gupta, C Chen, M Zhao, D Paredes, ...
Diagnostic pathology 15, 1-11, 2020
622020
GaNDLF: the generally nuanced deep learning framework for scalable end-to-end clinical workflows
S Pati, SP Thakur, İE Hamamcı, U Baid, B Baheti, M Bhalerao, O Güley, ...
Communications Engineering 2 (1), 23, 2023
452023
Deep learning-based mapping of tumor infiltrating lymphocytes in whole slide images of 23 types of cancer
S Abousamra, R Gupta, L Hou, R Batiste, T Zhao, A Shankar, A Rao, ...
Frontiers in oncology 11, 806603, 2022
362022
Weakly-supervised deep stain decomposition for multiplex IHC images
S Abousamra, D Fassler, L Hou, Y Zhang, R Gupta, T Kurc, ...
2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI), 481-485, 2020
242020
Multi-class cell detection using spatial context representation
S Abousamra, D Belinsky, J Van Arnam, F Allard, E Yee, R Gupta, T Kurc, ...
Proceedings of the IEEE/CVF International Conference on Computer Vision …, 2021
212021
Federated learning for the classification of tumor infiltrating lymphocytes
U Baid, S Pati, TM Kurc, R Gupta, E Bremer, S Abousamra, SP Thakur, ...
arXiv preprint arXiv:2203.16622, 2022
172022
Exascale deep learning to accelerate cancer research
RM Patton, JT Johnston, SR Young, CD Schuman, TE Potok, DC Rose, ...
2019 IEEE International Conference on Big Data (Big Data), 1488-1496, 2019
172019
Learning from thresholds: fully automated classification of tumor infiltrating lymphocytes for multiple cancer types
S Abousamra, L Hou, R Gupta, C Chen, D Samaras, T Kurc, R Batiste, ...
arXiv preprint arXiv:1907.03960, 2019
142019
Deep learning-based mapping of tumor infiltrating lymphocytes in whole slide images of 23 types of cancer. Front
S Abousamra, R Gupta, L Hou, R Batiste, T Zhao, A Shankar, A Rao, ...
Oncol 11 (806603), 10.3389, 2022
92022
ChampKit: A framework for rapid evaluation of deep neural networks for patch-based histopathology classification
JR Kaczmarzyk, R Gupta, TM Kurc, S Abousamra, JH Saltz, PK Koo
Computer Methods and Programs in Biomedicine 239, 107631, 2023
82023
Calibrating uncertainty for semi-supervised crowd counting
C Li, X Hu, S Abousamra, C Chen
2023 IEEE/CVF International Conference on Computer Vision (ICCV), 16685-16695, 2023
62023
Localization and tracking in 4D fluorescence microscopy imagery
S Abousamra, S Adar, N Elia, R Shilkrot
Proceedings of the IEEE conference on computer vision and pattern …, 2018
62018
Topology-guided multi-class cell context generation for digital pathology
S Abousamra, R Gupta, T Kurc, D Samaras, J Saltz, C Chen
Proceedings of the IEEE/CVF conference on computer vision and pattern …, 2023
52023
Fair and adaptive online set-based cache partitioning
S Abousamra, A El-Mahdy, S Selim
The 2011 International Conference on Computer Engineering & Systems, 9-16, 2011
52011
Evaluating histopathology transfer learning with ChampKit
JR Kaczmarzyk, TM Kurc, S Abousamra, R Gupta, JH Saltz, PK Koo
arXiv preprint arXiv:2206.06862, 2022
22022
An expandable informatics framework for enhancing central cancer registries with digital pathology specimens, computational imaging tools, and advanced mining capabilities
DJ Foran, EB Durbin, W Chen, E Sadimin, A Sharma, I Banerjee, T Kurc, ...
Journal of Pathology Informatics 13, 100167, 2022
22022
From whole slide tissues to knowledge: Mapping sub-cellular morphology of cancer
T Kurc, A Sharma, R Gupta, L Hou, H Le, S Abousamra, E Bremer, ...
Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries …, 2020
22020
Xiao Ling Hu
C Li, X Hu, S Abousamra, C Chen, A Konwer, X Xu, J Bae, P Prasanna, ...
22018
The system can't perform the operation now. Try again later.
Articles 1–20