SOX2 is an amplified lineage-survival oncogene in lung and esophageal squamous cell carcinomas AJ Bass, H Watanabe, CH Mermel, S Yu, S Perner, RG Verhaak, SY Kim, ... Nature genetics 41 (11), 1238-1242, 2009 | 1083 | 2009 |
A physical and regulatory map of host-influenza interactions reveals pathways in H1N1 infection SD Shapira, I Gat-Viks, BOV Shum, A Dricot, MM de Grace, L Wu, ... Cell 139 (7), 1255-1267, 2009 | 747 | 2009 |
Mutations causing medullary cystic kidney disease type 1 lie in a large VNTR in MUC1 missed by massively parallel sequencing A Kirby, A Gnirke, DB Jaffe, V Barešová, N Pochet, B Blumenstiel, C Ye, ... Nature genetics 45 (3), 299-303, 2013 | 315 | 2013 |
Systematic discovery of TLR signaling components delineates viral-sensing circuits N Chevrier, P Mertins, MN Artyomov, AK Shalek, M Iannacone, ... Cell 147 (4), 853-867, 2011 | 216 | 2011 |
Dissection of influenza infection in vivo by single-cell RNA sequencing Y Steuerman, M Cohen, N Peshes-Yaloz, L Valadarsky, O Cohn, E David, ... Cell systems 6 (6), 679-691. e4, 2018 | 204 | 2018 |
Genome-wide CRISPR screen identifies host dependency factors for influenza A virus infection B Li, SM Clohisey, BS Chia, B Wang, A Cui, T Eisenhaure, LD Schweitzer, ... Nature communications 11 (1), 164, 2020 | 183 | 2020 |
Personalized hydrogels for engineering diverse fully autologous tissue implants R Edri, I Gal, N Noor, T Harel, S Fleischer, N Adadi, O Green, D Shabat, ... Advanced materials 31 (1), 1803895, 2019 | 129 | 2019 |
Digital cell quantification identifies global immune cell dynamics during influenza infection Z Altboum, Y Steuerman, E David, Z Barnett‐Itzhaki, L Valadarsky, ... Molecular systems biology 10 (2), 720, 2014 | 128 | 2014 |
Scoring clustering solutions by their biological relevance I Gat-Viks, R Sharan, R Shamir Bioinformatics 19 (18), 2381-2389, 2003 | 119 | 2003 |
Cell composition analysis of bulk genomics using single-cell data A Frishberg, N Peshes-Yaloz, O Cohn, D Rosentul, Y Steuerman, ... Nature methods 16 (4), 327-332, 2019 | 109 | 2019 |
Extracellular matrix proteolysis by MT1-MMP contributes to influenza-related tissue damage and mortality D Talmi-Frank, Z Altboum, I Solomonov, Y Udi, DA Jaitin, M Klepfish, ... Cell host & microbe 20 (4), 458-470, 2016 | 95 | 2016 |
Analysing human neural stem cell ontogeny by consecutive isolation of Notch active neural progenitors R Edri, Y Yaffe, MJ Ziller, N Mutukula, R Volkman, E David, ... Nature communications 6 (1), 6500, 2015 | 88 | 2015 |
A probabilistic methodology for integrating knowledge and experiments on biological networks I Gat-Viks, A Tanay, D Raijman, R Shamir Journal of Computational Biology 13 (2), 165-181, 2006 | 79 | 2006 |
Refinement and expansion of signaling pathways: the osmotic response network in yeast I Gat-Viks, R Shamir Genome research 17 (3), 358-367, 2007 | 70 | 2007 |
Chain functions and scoring functions in genetic networks I Gat-Viks, R Shamir Bioinformatics 19 (suppl_1), i108-i117, 2003 | 59 | 2003 |
ImmQuant: a user-friendly tool for inferring immune cell-type composition from gene-expression data A Frishberg, A Brodt, Y Steuerman, I Gat-Viks Bioinformatics 32 (24), 3842-3843, 2016 | 55 | 2016 |
Deciphering molecular circuits from genetic variation underlying transcriptional responsiveness to stimuli I Gat-Viks, N Chevrier, R Wilentzik, T Eisenhaure, R Raychowdhury, ... Nature biotechnology 31 (4), 342-349, 2013 | 52 | 2013 |
Modeling and analysis of heterogeneous regulation in biological networks I Gat-Viks, A Tanay, R Shamir Journal of Computational Biology 11 (6), 1034-1049, 2004 | 52 | 2004 |
EZH2 promotes a bi-lineage identity in basal-like breast cancer cells RZ Granit, Y Gabai, T Hadar, Y Karamansha, L Liberman, I Waldhorn, ... Oncogene 32 (33), 3886-3895, 2013 | 49 | 2013 |
The pathophysiology of sepsis and precision-medicine-based immunotherapy EJ Giamarellos-Bourboulis, AC Aschenbrenner, M Bauer, C Bock, ... Nature immunology 25 (1), 19-28, 2024 | 40 | 2024 |