| Consistent concepts of self‐organization and self‐assembly JD Halley, DA Winkler Complexity 14 (2), 10-17, 2008 | 224 | 2008 |
| Classification of emergence and its relation to self‐organization JD Halley, DA Winkler Complexity 13 (5), 10-15, 2008 | 149 | 2008 |
| A general model for binary cell fate decision gene circuits with degeneracy: indeterminacy and switch behavior in the absence of cooperativity M Andrecut, JD Halley, DA Winkler, S Huang PloS one 6 (5), e19358, 2011 | 62 | 2011 |
| Excavation and architecture of Argentine ant nests JD Halley, M Burd, P Wells Insectes Sociaux 52, 350-356, 2005 | 61 | 2005 |
| Critical-like self-organization and natural selection: two facets of a single evolutionary process? JD Halley, DA Winkler BioSystems 92 (2), 148-158, 2008 | 38 | 2008 |
| Stem cell decision making and critical-like exploratory networks JD Halley, FR Burden, DA Winkler Stem Cell Research 2 (3), 165-177, 2009 | 27 | 2009 |
| Nonequilibrium dynamics of social groups: insights from foraging Argentine ants JD Halley, M Burd Insectes sociaux 51, 226-231, 2004 | 24 | 2004 |
| Self-organizing circuitry and emergent computation in mouse embryonic stem cells JD Halley, K Smith-Miles, DA Winkler, T Kalkan, S Huang, A Smith Stem cell research 8 (2), 324-333, 2012 | 20 | 2012 |
| Toward a Rosetta stone for the stem cell genome: Stochastic gene expression, network architecture, and external influences JD Halley, DA Winkler, FR Burden Stem Cell Research 1 (3), 157-168, 2008 | 15 | 2008 |
| Classification of self-organization and emergence in chemical and biological systems JD Halley, DA Winkler Australian journal of chemistry 59 (12), 849-853, 2006 | 13 | 2006 |
| Rapid self-organized criticality: Fractal evolution in extreme environments JD Halley, AC Warden, S Sadedin, W Li Physical Review E 70 (3), 036118, 2004 | 13 | 2004 |
| A conceptual and computational framework for modelling and understanding the non-equilibrium gene regulatory networks of mouse embryonic stem cells RB Greaves, S Dietmann, A Smith, S Stepney, JD Halley PLoS computational biology 13 (9), e1005713, 2017 | 11 | 2017 |
| The response of foraging Argentine ants, Linepithema humile, to disturbance JD Halley, MA Elgar Australian Journal of Zoology 49 (1), 59-69, 2001 | 11 | 2001 |
| Predictive Mesoscale Network Model of Cell Fate Decisions during C. elegans Embryogenesis DA Winkler, FR Burden, JD Halley Artificial life 15 (4), 411-421, 2009 | 9 | 2009 |
| Genome-wide mouse embryonic stem cell regulatory network self-organisation: a big data CoSMoS computational modelling approach RB Greaves, S Dietmann, A Smith, S Stepney, JD Halley | 3 | 2015 |
| Modelling stem cell properties and fate decisions DA Winkler, JD Halley, FR Burden | 2 | 2007 |
| Stochastic switch model for HSC fate decisions simulates a critical-like pluripotent state DA Winkler, JD Halley, S Huang, M Andrecut EXPERIMENTAL HEMATOLOGY 38 (9), S103-S104, 2010 | | 2010 |
| Modelling for Regenerative Medicine: systems biology meets systems chemistry DA Winkler, JD Halley, FR Burden International Beilstein Symposium on Systems Chemistry, 121-147, 2009 | | 2009 |
| Noisy Disturbances, Self-organisation and Natural Selection: Insights from Argentine Ants JD Halley Monash University, 2004 | | 2004 |
| SUPPORTING INFORMATION A general model for binary cell fate decision gene circuits with degeneracy: Indeterminacy and switch behavior in the absence of cooperativity M Andrecut, JD Halley, DA Winkler, S Huang | | |
Winkler, D*CSIRO or Monash or La Trobe or Defence or Nottingham or PharmacyVerified email at latrobe.edu.au
