Bernard M.E. Moret

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Tandy WarnowGrainger Distinguished Chair in Engineering, UIUCVerified email at illinois.edu
David A. BaderDistinguished Professor, New Jersey Institute of TechnologyVerified email at njit.edu
Jijun TangUniversity of South CarolinaVerified email at cse.sc.edu
Yu LinSchool of Computing, Australian National UniversityVerified email at anu.edu.au
Nicholas D. PattengaleVerified email at cs.unm.edu
Krister M. SwensonCNRS, LIRMM, Université MontpellierVerified email at lirmm.fr
Li-San WangUniversity of PennsylvaniaVerified email at upenn.edu
Stacia K. WymanInvestigator, Innovative Genomics Institute, UC BerkeleyVerified email at berkeley.edu
Luay NakhlehProfessor of Computer Science, Rice UniversityVerified email at rice.edu
Tiffani L. WilliamsTeaching Professor of CS, University of Urbana-ChampaignVerified email at illinois.edu
Vaibhav RajanAssistant Professor, Department of Information Systems & Analytics, School of Computing, NUSVerified email at nus.edu.sg
C. Randal LinderUniversity of Texas at AustinVerified email at austin.utexas.edu
Alexandros StamatakisFoundation for Research and Technology - Hellas, HITS gGmbH, KITVerified email at ics.forth.gr
Usman RoshanAssociate Professor, Department of Computer Science, New Jersey Institute of TechnologyVerified email at njit.edu
Robert JansenUniversity of Texas at AustinVerified email at austin.utexas.edu
Olaf R.P. Bininda-EmondsProfessor of Molecular Systematics, University of OldenburgVerified email at uni-oldenburg.de
Masoud AipourEPFLVerified email at epfl.ch
Xiuwei ZhangGeorgia Institute of TechnologyVerified email at gatech.edu
Mingfu ShaoDepartment of Computer Science and Engineerings, The Pennsylvania State UniversityVerified email at psu.edu
Katherine St. JohnCity University of New YorkVerified email at hunter.cuny.edu

Bernard M.E. Moret

ISCB Fellow, Professor emeritus, Computer & Communication Sciences, EPFL

Verified email at epfl.ch - Homepage

Models and Algorithms Phylogenetics Network Evolution


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How many bootstrap replicates are necessary? ND Pattengale, M Alipour, ORP Bininda-Emonds, BME Moret, ... Journal of Computational Biology 17 (3), 337-354, 2010	803	2010
A linear-time algorithm for computing the inversion distance between signed permutations with an experimental study DA Bader, BME Moret, M Yan J. of Computational Biology 8 (5), 483-491, 2001	501	2001
Decision trees and diagrams BME Moret ACM Computing Surveys (CSUR) 14 (4), 593-623, 1982	481	1982
How many bootstrap replicates are necessary? ND Pattengale, M Alipour, ORP Bininda-Emonds, BME Moret, ... Annual Int'l Conf. on Research in Comp. Bio. RECOMB, in Lecture Notes in …, 2009	393	2009
Phylogenetic networks: modeling, reconstructibility, and accuracy BME Moret, L Nakhleh, T Warnow, CR Linder, A Tholse, A Padolina, ... IEEE/ACM Trans. on Computational Biology and Bioinformatics 1 (1), 13-23, 2004	237	2004
Algorithms from P to NP (vol. 1): Design and Efficiency BME Moret, HD Shapiro Benjamin-Cummings Publishing Co., 1991	231	1991
An empirical comparison of phylogenetic methods on chloroplast gene order data in Campanulaceae ME Cosner, RK Jansen, BME Moret, LA Raubeson, LS Wang, T Warnow, ... Comparative Genomics, 99-122, 2000	215*	2000
New approaches for reconstructing phylogenies from gene order data BME Moret, LS Wang, T Warnow, SK Wyman 9th Conf. on Intelligent Systems in Molecular Biology ISMB'01, in …, 2001	196	2001
A new implementation and detailed study of breakpoint analysis BME Moret, S Wyman, DA Bader, T Warnow, M Yan 6th Pacific Symp. on Biocomputing PSB'01, 583-594, 2001	196	2001
Steps toward accurate reconstructions of phylogenies from gene-order data BME Moret, J Tang, LS Wang, T Warnow J. of Computer and System Sciences 65 (3), 508-525, 2002	159	2002
Towards a discipline of experimental algorithmics BME Moret Data Structures, Near Neighbor Searches, and Methodology: Fifth and Sixth …, 2002	142	2002
The Theory of Computation BME Moret Pearson, 1998	142	1998
Rec-I-DCM3: a fast algorithmic technique for reconstructing phylogenetic trees UW Roshan, T Warnow, BME Moret, TL Williams 3rd Computational Systems Bioinformatics Conf. CSB'04, 98-109, 2004	141	2004
Map labeling and its generalizations S Doddi, MV Marathe, A Mirzaian, BME Moret, B Zhu 8th ACM-SIAM Symp. on Discrete Algorithms SODA'97, 148-157, 1997	125	1997
Inversion medians outperform breakpoint medians in phylogeny reconstruction from gene-order data BME Moret, A Siepel, J Tang, T Liu 2nd Workshop on Algorithms in Bioinformatics WABI'02, 521-536, 2002	117	2002
Genomic distances under deletions and insertions M Marron, KM Swenson, BME Moret Theoretical Computer Science 325 (3), 347-360, 2004	108	2004
Scaling up accurate phylogenetic reconstruction from gene-order data J Tang, BME Moret 11th Conf. on Intelligent Systems in Molecular Biology ISMB'03, in …, 2003	106	2003
On minimizing a set of tests BME Moret, HD Shapiro SIAM J. on Scientific and Statistical Computing 6, 983-1003, 1985	105	1985
Approximating the true evolutionary distance between two genomes KM Swenson, M Marron, JV Earnest-DeYoung, BME Moret ACM J. of Experimental Algorithmics 12, 3.5, 2008	103	2008
Evaluating synteny for improved comparative studies CG Ghiurcuta, BME Moret 22nd Symp. on Intelligent Methods in Molecular Biology ISMB'14, in …, 2014	99	2014

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