Kai Dührkop
Kai Dührkop
PhD, Lehrstuhl Bioinformatik, Friedrich-Schiller Universität Jena
Подтвержден адрес электронной почты в домене uni-jena.de - Главная страница
Название
Процитировано
Процитировано
Год
Searching molecular structure databases with tandem mass spectra using CSI: FingerID
K Dührkop, H Shen, M Meusel, J Rousu, S Böcker
Proceedings of the National Academy of Sciences 112 (41), 12580-12585, 2015
4312015
SIRIUS 4: a rapid tool for turning tandem mass spectra into metabolite structure information
K Dührkop, M Fleischauer, M Ludwig, AA Aksenov, AV Melnik, M Meusel, ...
Nature methods 16 (4), 299-302, 2019
2542019
Feature-based molecular networking in the GNPS analysis environment
LF Nothias, D Petras, R Schmid, K Dührkop, J Rainer, A Sarvepalli, ...
Nature methods 17 (9), 905-908, 2020
1622020
Critical assessment of small molecule identification 2016: automated methods
EL Schymanski, C Ruttkies, M Krauss, C Brouard, T Kind, K Dührkop, ...
Journal of cheminformatics 9 (1), 1-21, 2017
1232017
Fragmentation trees reloaded
S Böcker, K Dührkop
Journal of cheminformatics 8 (1), 1-26, 2016
1042016
Significance estimation for large scale metabolomics annotations by spectral matching
K Scheubert, F Hufsky, D Petras, M Wang, LF Nothias, K Dührkop, ...
Nature Communications 8 (1), 1-10, 2017
1002017
Metabolite identification through multiple kernel learning on fragmentation trees
H Shen, K Dührkop, S Böcker, J Rousu
Bioinformatics 30 (12), i157-i164, 2014
862014
Current challenges in plant eco-metabolomics
K Peters, A Worrich, A Weinhold, O Alka, G Balcke, C Birkemeyer, ...
International Journal of Molecular Sciences 19 (5), 1385, 2018
632018
Fast metabolite identification with input output kernel regression
C Brouard, H Shen, K Dührkop, F d'Alché-Buc, S Böcker, J Rousu
Bioinformatics 32 (12), i28-i36, 2016
612016
Systematic classification of unknown metabolites using high-resolution fragmentation mass spectra
K Dührkop, LF Nothias, M Fleischauer, R Reher, M Ludwig, MA Hoffmann, ...
Nature Biotechnology 39 (4), 462-471, 2021
512021
Molecular formula identification using isotope pattern analysis and calculation of fragmentation trees
K Dührkop, F Hufsky, S Böcker
Mass Spectrometry 3 (Special_Issue_2), S0037-S0037, 2014
272014
Molecular formula identification with SIRIUS
K Dührkop, K Scheubert, S Böcker
Metabolites 3 (2), 506-516, 2013
272013
Chemically informed analyses of metabolomics mass spectrometry data with Qemistree
A Tripathi, Y Vázquez-Baeza, JM Gauglitz, M Wang, K Dührkop, ...
Nature Chemical Biology 17 (2), 146-151, 2021
232021
Bayesian networks for mass spectrometric metabolite identification via molecular fingerprints
M Ludwig, K Dührkop, S Böcker
Bioinformatics 34 (13), i333-i340, 2018
222018
Database-independent molecular formula annotation using Gibbs sampling through ZODIAC
M Ludwig, LF Nothias, K Dührkop, I Koester, M Fleischauer, MA Hoffmann, ...
Nature Machine Intelligence 2 (10), 629-641, 2020
172020
Fast alignment of fragmentation trees
F Hufsky, K Dührkop, F Rasche, M Chimani, S Böcker
Bioinformatics 28 (12), i265-i273, 2012
172012
Classes for the masses: Systematic classification of unknowns using fragmentation spectra
K Dührkop, LF Nothias, M Fleischauer, M Ludwig, MA Hoffmann, J Rousu, ...
BioRxiv, 2020
152020
Fragmentation trees reloaded
K Dührkop, S Böcker
International Conference on Research in Computational Molecular Biology, 65-79, 2015
112015
Faster mass decomposition
K Dührkop, M Ludwig, M Meusel, S Böcker
International Workshop on Algorithms in Bioinformatics, 45-58, 2013
112013
Speedy colorful subtrees
WTJ White, S Beyer, K Dührkop, M Chimani, S Böcker
International Computing and Combinatorics Conference, 310-322, 2015
102015
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Статьи 1–20