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Michael Sammeth
Michael Sammeth
Institute of Biophysics Carlos Chagas Filho (IBCCF), Federal University of Rio de Janeiro (UFRJ)
Verified email at sammeth.net - Homepage
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Cited by
Year
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
172272012
The genotype-tissue expression (GTEx) project
J Lonsdale, J Thomas, M Salvatore, R Phillips, E Lo, S Shad, R Hasz, ...
Nature genetics 45 (6), 580-585, 2013
81872013
Landscape of transcription in human cells
S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann, A Mortazavi, ...
Nature 489 (7414), 101-108, 2012
57412012
The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans
GTEx Consortium, KG Ardlie, DS Deluca, AV Segrè, TJ Sullivan, ...
Science 348 (6235), 648-660, 2015
47832015
Genetic effects on gene expression across human tissues
GTEx Consortium Lead analysts: Aguet François 1 Brown Andrew A. 2 3 4 Castel ...
Nature 550 (7675), 204-213, 2017
35132017
Transcriptome and genome sequencing uncovers functional variation in humans
T Lappalainen, M Sammeth, MR Friedländer, PAC ‘t Hoen, J Monlong, ...
Nature 501 (7468), 506-511, 2013
21192013
The human transcriptome across tissues and individuals
M Melé, PG Ferreira, F Reverter, DS DeLuca, J Monlong, M Sammeth, ...
Science 348 (6235), 660-665, 2015
13662015
Assessment of transcript reconstruction methods for RNA-seq
T Steijger, JF Abril, PG Engström, F Kokocinski, TJ Hubbard, R Guigó, ...
Nature methods 10 (12), 1177-1184, 2013
7922013
The GEM mapper: fast, accurate and versatile alignment by filtration
S Marco-Sola, M Sammeth, R Guigó, P Ribeca
Nature methods 9 (12), 1185-1188, 2012
6652012
Dynamic landscape and regulation of RNA editing in mammals
MH Tan, Q Li, R Shanmugam, R Piskol, J Kohler, AN Young, KI Liu, ...
Nature 550 (7675), 249-254, 2017
5892017
Nucleosome positioning as a determinant of exon recognition
H Tilgner, C Nikolaou, S Althammer, M Sammeth, M Beato, J Valcárcel, ...
Nature structural & molecular biology 16 (9), 996-1001, 2009
5492009
The human pancreatic islet transcriptome: expression of candidate genes for type 1 diabetes and the impact of pro-inflammatory cytokines
DL Eizirik, M Sammeth, T Bouckenooghe, G Bottu, G Sisino, ...
PLoS genetics 8 (3), e1002552, 2012
5232012
Genome-Wide Association Study in Asian Populations Identifies Variants in ETS1 and WDFY4 Associated with Systemic Lupus Erythematosus
W Yang, N Shen, DQ Ye, Q Liu, Y Zhang, XX Qian, N Hirankarn, D Ying, ...
PLoS genetics 6 (2), e1000841, 2010
4642010
Effect of predicted protein-truncating genetic variants on the human transcriptome
MA Rivas, M Pirinen, DF Conrad, M Lek, EK Tsang, KJ Karczewski, ...
Science 348 (6235), 666-669, 2015
3622015
ASTALAVISTA: dynamic and flexible analysis of alternative splicing events in custom gene datasets
S Foissac, M Sammeth
Nucleic acids research 35 (suppl_2), W297-W299, 2007
3592007
A general definition and nomenclature for alternative splicing events
M Sammeth, S Foissac, R Guigó
PLoS computational biology 4 (8), e1000147, 2008
3572008
Modelling and simulating generic RNA-Seq experiments with the flux simulator
T Griebel, B Zacher, P Ribeca, E Raineri, V Lacroix, R Guigó, M Sammeth
Nucleic acids research 40 (20), 10073-10083, 2012
3392012
RNA sequencing identifies dysregulation of the human pancreatic islet transcriptome by the saturated fatty acid palmitate
M Cnop, B Abdulkarim, G Bottu, DA Cunha, M Igoillo-Esteve, M Masini, ...
Diabetes 63 (6), 1978-1993, 2014
2932014
The effects of death and post-mortem cold ischemia on human tissue transcriptomes
PG Ferreira, M Muñoz-Aguirre, F Reverter, CP Sa Godinho, A Sousa, ...
Nature communications 9 (1), 490, 2018
2912018
Based Upon Repeat Pattern (BURP): an algorithm to characterize the long-term evolution of Staphylococcus aureus populations based on spa polymorphisms
A Mellmann, T Weniger, C Berssenbrügge, J Rothgänger, M Sammeth, ...
BMC microbiology 7, 1-6, 2007
2792007
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