Daniel Lopez Ferrer
Daniel Lopez Ferrer
Director of Proteomics and Translational Research, Thermo Fisher Scientific
Verified email at
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Omic data from evolved E. coli are consistent with computed optimal growth from genome‐scale models
NE Lewis, KK Hixson, TM Conrad, JA Lerman, P Charusanti, AD Polpitiya, ...
Molecular systems biology 6 (1), 390, 2010
Reversed‐phase chromatography with multiple fraction concatenation strategy for proteome profiling of human MCF10A cells
Y Wang, F Yang, MA Gritsenko, Y Wang, T Clauss, T Liu, Y Shen, ...
Proteomics 11 (10), 2019-2026, 2011
S-nitrosylation of Hsp90 promotes the inhibition of its ATPase and endothelial nitric oxide synthase regulatory activities
A Martínez-Ruiz, L Villanueva, CG de Orduña, D López-Ferrer, ...
Proceedings of the National Academy of Sciences 102 (24), 8525-8530, 2005
Trends in sample preparation for classical and second generation proteomics
B Cañas, C Piñeiro, E Calvo, D López-Ferrer, JM Gallardo
Journal of chromatography A 1153 (1-2), 235-258, 2007
Mass spectrometry technologies for proteomics
B Cañas, D López-Ferrer, A Ramos-Fernández, E Camafeita, E Calvo
Briefings in Functional Genomics 4 (4), 295-320, 2006
Ultra fast trypsin digestion of proteins by high intensity focused ultrasound
D Lopez-Ferrer, JL Capelo, J Vazquez
Journal of proteome research 4 (5), 1569-1574, 2005
Properties of average score distributions of SEQUEST
S Martınez-Bartolome, P Navarro, F Martın-Maroto, D López-Ferrer, ...
Proteomics 7, 1135-1145, 2008
Improved method for differential expression proteomics using trypsin-catalyzed 18O labeling with a correction for labeling efficiency
A Ramos-Fernández, D López-Ferrer, J Vázquez
Molecular & Cellular Proteomics 6 (7), 1274-1286, 2007
Statistical model for large-scale peptide identification in databases from tandem mass spectra using SEQUEST
D López-Ferrer, S Martínez-Bartolomé, M Villar, M Campillos, ...
Analytical Chemistry 76 (23), 6853-6860, 2004
Application of pressurized solvents for ultrafast trypsin hydrolysis in proteomics: proteomics on the fly
D López-Ferrer, K Petritis, KK Hixson, TH Heibeck, RJ Moore, ME Belov, ...
Journal of proteome research 7 (8), 3276-3281, 2008
Sample treatment for protein identification by mass spectrometry-based techniques
D Lopez-Ferrer, B Canas, J Vazquez, C Lodeiro, R Rial-Otero, I Moura, ...
TrAC Trends in Analytical Chemistry 25 (10), 996-1005, 2006
High‐sensitivity analysis of specific peptides in complex samples by selected MS/MS ion monitoring and linear ion trap mass spectrometry: application to biological studies
I Jorge, EM Casas, M Villar, I Ortega‐Pérez, D López‐Ferrer, ...
Journal of mass spectrometry 42 (11), 1391-1403, 2007
Ultrasensitive single-cell proteomics workflow identifies> 1000 protein groups per mammalian cell
Y Cong, K Motamedchaboki, SA Misal, Y Liang, AJ Guise, T Truong, ...
Chemical Science 12 (3), 1001-1006, 2021
Improved single-cell proteome coverage using narrow-bore packed NanoLC columns and ultrasensitive mass spectrometry
Y Cong, Y Liang, K Motamedchaboki, R Huguet, T Truong, R Zhao, ...
Analytical chemistry 92 (3), 2665-2671, 2020
Fast monitoring of species-specific peptide biomarkers using high-intensity-focused-ultrasound-assisted tryptic digestion and selected MS/MS ion monitoring
M Carrera, B Canas, D López-Ferrer, C Pineiro, J Vázquez, JM Gallardo
Analytical chemistry 83 (14), 5688-5695, 2011
Quantitative proteomics using 16O/18O labeling and linear ion trap mass spectrometry
D López‐Ferrer, A Ramos‐Fernández, S Martínez‐Bartolomé, ...
Proteomics 6 (S1), S4-S11, 2006
On-line digestion system for protein characterization and proteome analysis
D López-Ferrer, K Petritis, NM Lourette, B Clowers, KK Hixson, T Heibeck, ...
Analytical chemistry 80 (23), 8930-8936, 2008
Nanobiocatalysis for protein digestion in proteomic analysis
J Kim, BC Kim, D Lopez‐Ferrer, K Petritis, RD Smith
Proteomics 10 (4), 687-699, 2010
Highly stable trypsin‐aggregate coatings on polymer nanofibers for repeated protein digestion
BC Kim, D Lopez‐Ferrer, SM Lee, HK Ahn, S Nair, SH Kim, BS Kim, ...
Proteomics 9 (7), 1893-1900, 2009
Rapid sample processing for LC-MS-based quantitative proteomics using high intensity focused ultrasound
D López-Ferrer, TH Heibeck, K Petritis, KK Hixson, W Qian, ME Monroe, ...
Journal of proteome research 7 (9), 3860-3867, 2008
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