ATSAS 2.8: a comprehensive data analysis suite for small-angle scattering from macromolecular solutions D Franke, MV Petoukhov, PV Konarev, A Panjkovich, A Tuukkanen, ... Journal of applied crystallography 50 (4), 1212-1225, 2017 | 1428 | 2017 |
ATSAS 3.0: expanded functionality and new tools for small-angle scattering data analysis K Manalastas-Cantos, PV Konarev, NR Hajizadeh, AG Kikhney, ... Journal of applied crystallography 54 (1), 343-355, 2021 | 691 | 2021 |
CHROMIXS: automatic and interactive analysis of chromatography-coupled small-angle X-ray scattering data A Panjkovich, DI Svergun Bioinformatics 34 (11), 1944-1946, 2018 | 269 | 2018 |
Deciphering conformational transitions of proteins by small angle X-ray scattering and normal mode analysis A Panjkovich, DI Svergun Physical Chemistry Chemical Physics 18 (8), 5707-5719, 2016 | 208 | 2016 |
Comparison of different melting temperature calculation methods for short DNA sequences A Panjkovich, F Melo Bioinformatics 21 (6), 711-722, 2005 | 177 | 2005 |
PARS: a web server for the prediction of protein allosteric and regulatory sites A Panjkovich, X Daura Bioinformatics 30 (9), 1314-1315, 2014 | 124 | 2014 |
Exploiting protein flexibility to predict the location of allosteric sites A Panjkovich, X Daura BMC bioinformatics 13, 1-12, 2012 | 92 | 2012 |
3did Update: domain–domain and peptide-mediated interactions of known 3D structure A Stein, A Panjkovich, P Aloy Nucleic acids research 37 (suppl_1), D300-D304, 2009 | 90 | 2009 |
Assessing the structural conservation of protein pockets to study functional and allosteric sites: implications for drug discovery A Panjkovich, X Daura BMC structural biology 10, 1-14, 2010 | 59 | 2010 |
Molecular determinants of magnesium-dependent synaptic plasticity at electrical synapses formed by connexin36 N Palacios-Prado, S Chapuis, A Panjkovich, J Fregeac, JI Nagy, ... Nature communications 5 (1), 4667, 2014 | 54 | 2014 |
A systematic study of the energetics involved in structural changes upon association and connectivity in protein interaction networks A Stein, M Rueda, A Panjkovich, M Orozco, P Aloy Structure 19 (6), 881-889, 2011 | 53 | 2011 |
Structural and functional dissection of the DH and PH domains of oncogenic Bcr-Abl tyrosine kinase S Reckel, C Gehin, D Tardivon, S Georgeon, T Kükenshöner, F Löhr, ... Nature communications 8 (1), 2101, 2017 | 50 | 2017 |
SASpy: a PyMOL plugin for manipulation and refinement of hybrid models against small angle X-ray scattering data A Panjkovich, DI Svergun Bioinformatics 32 (13), 2062-2064, 2016 | 43 | 2016 |
dnaMATE: a consensus melting temperature prediction server for short DNA sequences A Panjkovich, T Norambuena, F Melo Nucleic acids research 33 (suppl_2), W570-W572, 2005 | 34 | 2005 |
Shedding light on the interaction of human anti-apoptotic Bcl-2 protein with ligands through biophysical and in silico studies J Ramos, J Muthukumaran, F Freire, J Paquete-Ferreira, ... International journal of molecular sciences 20 (4), 860, 2019 | 33 | 2019 |
Btk SH2-kinase interface is critical for allosteric kinase activation and its targeting inhibits B-cell neoplasms DP Duarte, AJ Lamontanara, G La Sala, S Jeong, YK Sohn, A Panjkovich, ... Nature communications 11 (1), 2319, 2020 | 26 | 2020 |
DARA: a web server for rapid search of structural neighbours using solution small angle X-ray scattering data AG Kikhney, A Panjkovich, AV Sokolova, DI Svergun Bioinformatics 32 (4), 616-618, 2016 | 23 | 2016 |
Highly selective tungstate transporter protein TupA from Desulfovibrio alaskensis G20 AR Otrelo-Cardoso, RR Nair, MAS Correia, RSC Cordeiro, A Panjkovich, ... Scientific reports 7 (1), 5798, 2017 | 16 | 2017 |
Predicting protein–protein interaction specificity through the integration of three-dimensional structural information and the evolutionary record of protein domains A Panjkovich, P Aloy Molecular Biosystems 6 (4), 741-749, 2010 | 14 | 2010 |
antibacTR: dynamic antibacterial-drug-target ranking integrating comparative genomics, structural analysis and experimental annotation A Panjkovich, I Gibert, X Daura BMC genomics 15, 1-10, 2014 | 13 | 2014 |