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Ana-Nicoleta Bondar
Ana-Nicoleta Bondar
University of Bucharest, Faculty of Physics
Verified email at fizica.unibuc.ro
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Cited by
Cited by
Year
The retinal conformation and its environment in rhodopsin in light of a new 2.2 Å crystal structure
T Okada, M Sugihara, AN Bondar, M Elstner, P Entel, V Buss
Journal of molecular biology 342 (2), 571-583, 2004
13092004
A three-dimensional movie of structural changes in bacteriorhodopsin
E Nango, A Royant, M Kubo, T Nakane, C Wickstrand, T Kimura, ...
Science 354 (6319), 1552-1557, 2016
4562016
Membrane protein structure, function, and dynamics: a perspective from experiments and theory
Z Cournia, TW Allen, I Andricioaei, B Antonny, D Baum, G Brannigan, ...
The Journal of membrane biology 248, 611-640, 2015
2252015
Mechanism of primary proton transfer in bacteriorhodopsin
AN Bondar, M Elstner, S Suhai, JC Smith, S Fischer
Structure 12 (7), 1281-1288, 2004
1512004
Rhomboid protease dynamics and lipid interactions
AN Bondar, C del Val, SH White
Structure 17 (3), 395-405, 2009
1352009
Key role of electrostatic interactions in bacteriorhodopsin proton transfer
AN Bondar, S Fischer, JC Smith, M Elstner, S Suhai
Journal of the American Chemical Society 126 (44), 14668-14677, 2004
1172004
Extended protein/water H-bond networks in photosynthetic water oxidation
AN Bondar, H Dau
Biochimica et Biophysica Acta (BBA)-Bioenergetics 1817 (8), 1177-1190, 2012
982012
Hydrogen bond dynamics in membrane protein function
AN Bondar, SH White
Biochimica et Biophysica Acta (BBA)-Biomembranes 1818 (4), 942-950, 2012
892012
Key role of active-site water molecules in bacteriorhodopsin proton-transfer reactions
AN Bondar, J Baudry, S Suhai, S Fischer, JC Smith
The Journal of Physical Chemistry B 112 (47), 14729-14741, 2008
822008
Structure, dynamics and reactions of protein hydration water
JC Smith, F Merzel, AN Bondar, A Tournier, S Fischer
Philosophical Transactions of the Royal Society of London. Series B, 2004
812004
Proton-coupled dynamics in lactose permease
M Andersson, AN Bondar, JA Freites, DJ Tobias, HR Kaback, SH White
Structure 20 (11), 1893-1904, 2012
692012
Dynamics of SecY translocons with translocation-defective mutations
AN Bondar, C Del Val, JA Freites, DJ Tobias, SH White
Structure 18 (7), 847-857, 2010
642010
Dynamics of long-distance hydrogen-bond networks in photosystem II
F Guerra, M Siemers, C Mielack, AN Bondar
The Journal of Physical Chemistry B 122 (17), 4625-4641, 2018
622018
Suppression of the back proton-transfer from Asp85 to the retinal Schiff base in bacteriorhodopsin: a theoretical analysis of structural elements
AN Bondar, S Suhai, S Fischer, JC Smith, M Elstner
Journal of structural biology 157 (3), 454-469, 2007
542007
A new group of eubacterial light-driven retinal-binding proton pumps with an unusual cytoplasmic proton donor
A Harris, M Ljumovic, AN Bondar, Y Shibata, S Ito, K Inoue, H Kandori, ...
Biochimica et Biophysica Acta (BBA)-Bioenergetics 1847 (12), 1518-1529, 2015
522015
Anomalous behavior of water inside the SecY translocon
S Capponi, M Heyden, AN Bondar, DJ Tobias, SH White
Proceedings of the National Academy of Sciences 112 (29), 9016-9021, 2015
482015
Coupling of retinal, protein, and water dynamics in squid rhodopsin
E Jardón-Valadez, AN Bondar, DJ Tobias
Biophysical journal 99 (7), 2200-2207, 2010
442010
Exploring cavity dynamics in biomolecular systems
N Lindow, D Baum, AN Bondar, HC Hege
BMC bioinformatics 14, 1-12, 2013
432013
Kinetics of proton release and uptake by channelrhodopsin-2
M Nack, I Radu, BJ Schultz, T Resler, R Schlesinger, AN Bondar, ...
FEBS letters 586 (9), 1344-1348, 2012
422012
Bridge: A graph-based algorithm to analyze dynamic H-bond networks in membrane proteins
M Siemers, M Lazaratos, K Karathanou, F Guerra, LS Brown, AN Bondar
Journal of chemical theory and computation 15 (12), 6781-6798, 2019
412019
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