| Single-cell chromatin modification profiling reveals increased epigenetic variations with aging P Cheung, F Vallania, HC Warsinske, M Donato, S Schaffert, SE Chang, ... Cell 173 (6), 1385-1397. e14, 2018 | 301 | 2018 |
| Unsupervised analysis of transcriptomics in bacterial sepsis across multiple datasets reveals three robust clusters TE Sweeney, TD Azad, M Donato, WA Haynes, TM Perumal, R Henao, ... Critical care medicine 46 (6), 915, 2018 | 244 | 2018 |
| Methods and approaches in the topology-based analysis of biological pathways C Mitrea, Z Taghavi, B Bokanizad, S Hanoudi, R Tagett, M Donato, ... Frontiers in Physiology 4, 278, 2013 | 238 | 2013 |
| Analysis and correction of crosstalk effects in pathway analysis M Donato, Z Xu, A Tomoiaga, JG Granneman, RG MacKenzie, R Bao, ... Genome research 23 (11), 1885-1893, 2013 | 151 | 2013 |
| The single-cell epigenomic and transcriptional landscape of immunity to influenza vaccination F Wimmers, M Donato, A Kuo, T Ashuach, S Gupta, C Li, M Dvorak, ... Cell 184 (15), 3915-3935. e21, 2021 | 149 | 2021 |
| The immunoregulatory landscape of human tuberculosis granulomas EF McCaffrey, M Donato, L Keren, Z Chen, A Delmastro, MB Fitzpatrick, ... Nature immunology 23 (2), 318-329, 2022 | 122 | 2022 |
| A novel computational approach for drug repurposing using systems biology A Peyvandipour, N Saberian, A Shafi, M Donato, S Draghici Bioinformatics 34 (16), 2817-2825, 2018 | 104 | 2018 |
| Cellular senescence impairs the reversibility of pulmonary arterial hypertension DE Van Der Feen, GPL Bossers, QAJ Hagdorn, JR Moonen, K Kurakula, ... Science translational medicine 12 (554), eaaw4974, 2020 | 80 | 2020 |
| Multi-cohort analysis of host immune response identifies conserved protective and detrimental modules associated with severity across viruses H Zheng, AM Rao, D Dermadi, J Toh, LM Jones, M Donato, Y Liu, Y Su, ... Immunity 54 (4), 753-768. e5, 2021 | 51 | 2021 |
| Macrophage-derived IL-6 trans-signalling as a novel target in the pathogenesis of bronchopulmonary dysplasia D Hirani, CM Alvira, S Danopoulos, C Milla, M Donato, L Tian, J Mohr, ... European Respiratory Journal 59 (2), 2022 | 48 | 2022 |
| FHIT, a Novel Modifier Gene in Pulmonary Arterial Hypertension S Dannewitz Prosseda, X Tian, K Kuramoto, M Boehm, D Sudheendra, ... American journal of respiratory and critical care medicine 199 (1), 83-98, 2019 | 47 | 2019 |
| A new computational drug repurposing method using established disease–drug pair knowledge N Saberian, A Peyvandipour, M Donato, S Ansari, S Draghici Bioinformatics 35 (19), 3672-3678, 2019 | 46 | 2019 |
| Incorporating gene significance in the impact analysis of signaling pathways C Voichita, M Donato, S Draghici 2012 11th International Conference on Machine Learning and Applications 1 …, 2012 | 45 | 2012 |
| Repression of CTSG, ELANE and PRTN3-mediated histone H3 proteolytic cleavage promotes monocyte-to-macrophage differentiation P Cheung, S Schaffert, SE Chang, M Dvorak, M Donato, C Macaubas, ... Nature Immunology 22 (6), 711-722, 2021 | 44 | 2021 |
| Cross-clustering: a partial clustering algorithm with automatic estimation of the number of clusters P Tellaroli, M Bazzi, M Donato, AR Brazzale, S Drăghici PloS one 11 (3), e0152333, 2016 | 38 | 2016 |
| A novel bi-level meta-analysis approach: applied to biological pathway analysis T Nguyen, R Tagett, M Donato, C Mitrea, S Draghici Bioinformatics 32 (3), 409-416, 2016 | 35 | 2016 |
| Single-cell epigenetics–Chromatin modification atlas unveiled by mass cytometry P Cheung, F Vallania, M Dvorak, SE Chang, S Schaffert, M Donato, ... Clinical Immunology 196, 40-48, 2018 | 33 | 2018 |
| The Biological Connection Markup Language: a SBGN-compliant format for visualization, filtering and analysis of biological pathways L Beltrame, E Calura, RR Popovici, L Rizzetto, DR Guedez, M Donato, ... Bioinformatics 27 (15), 2127-2133, 2011 | 33 | 2011 |
| Inflammatory macrophage–associated 3-gene signature predicts subclinical allograft injury and graft survival TD Azad, M Donato, L Heylen, AB Liu, SS Shen-Orr, TE Sweeney, ... JCI insight 3 (2), 2018 | 30 | 2018 |
| Rapid GPR183-mediated recruitment of eosinophils to the lung after Mycobacterium tuberculosis infection AC Bohrer, E Castro, CE Tocheny, M Assmann, B Schwarz, E Bohrnsen, ... Cell reports 40 (4), 2022 | 21 | 2022 |
Purvesh KhatriStanford UniversityVerified email at stanford.edu
