Alexey Gurevich
Alexey Gurevich
Saint Petersburg State University, Center for Algorithmic Biotechnology
Подтвержден адрес электронной почты в домене spbu.ru - Главная страница
НазваниеПроцитированоГод
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing
A Bankevich, S Nurk, D Antipov, AA Gurevich, M Dvorkin, AS Kulikov, ...
Journal of computational biology 19 (5), 455-477, 2012
66922012
QUAST: quality assessment tool for genome assemblies
A Gurevich, V Saveliev, N Vyahhi, G Tesler
Bioinformatics 29 (8), 1072-1075, 2013
18162013
Assembling single-cell genomes and mini-metagenomes from chimeric MDA products
S Nurk, A Bankevich, D Antipov, AA Gurevich, A Korobeynikov, A Lapidus, ...
Journal of Computational Biology 20 (10), 714-737, 2013
4642013
Assembling genomes and mini-metagenomes from highly chimeric reads
S Nurk, A Bankevich, D Antipov, A Gurevich, A Korobeynikov, A Lapidus, ...
Annual International Conference on Research in Computational Molecular …, 2013
225*2013
Critical assessment of metagenome interpretation—a benchmark of metagenomics software
A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ...
Nature methods 14 (11), 1063, 2017
1842017
MetaQUAST: evaluation of metagenome assemblies
A Mikheenko, V Saveliev, A Gurevich
Bioinformatics 32 (7), 1088-1090, 2015
1292015
ExSPAnder: a universal repeat resolver for DNA fragment assembly
AD Prjibelski, I Vasilinetc, A Bankevich, A Gurevich, T Krivosheeva, ...
Bioinformatics 30 (12), i293-i301, 2014
572014
Dereplication of peptidic natural products through database search of mass spectra
H Mohimani, A Gurevich, A Mikheenko, N Garg, LF Nothias, A Ninomiya, ...
Nature chemical biology 13 (1), 30, 2017
562017
Versatile genome assembly evaluation with QUAST-LG
A Mikheenko, A Prjibelski, V Saveliev, D Antipov, A Gurevich
Bioinformatics 34 (13), i142-i150, 2018
432018
Icarus: visualizer for de novo assembly evaluation
A Mikheenko, G Valin, A Prjibelski, V Saveliev, A Gurevich
Bioinformatics 32 (21), 3321-3323, 2016
252016
Increased diversity of peptidic natural products revealed by modification-tolerant database search of mass spectra
A Gurevich, A Mikheenko, A Shlemov, A Korobeynikov, H Mohimani, ...
Nature microbiology 3 (3), 319, 2018
202018
Dereplication of microbial metabolites through database search of mass spectra
H Mohimani, A Gurevich, A Shlemov, A Mikheenko, A Korobeynikov, ...
Nature communications 9 (1), 4035, 2018
182018
Assembling short reads from jumping libraries with large insert sizes
I Vasilinetc, AD Prjibelski, A Gurevich, A Korobeynikov, PA Pevzner
Bioinformatics 31 (20), 3262-3268, 2015
122015
Metabolic fingerprints from the human oral microbiome reveal a vast knowledge gap of secreted small peptidic molecules
A Edlund, N Garg, H Mohimani, A Gurevich, X He, W Shi, PC Dorrestein, ...
MSystems 2 (4), e00058-17, 2017
82017
Spatial molecular architecture of the microbial community of a peltigera lichen
N Garg, Y Zeng, A Edlund, AV Melnik, LM Sanchez, H Mohimani, ...
MSystems 1 (6), e00139-16, 2016
72016
De Novo Peptide Sequencing Reveals a Vast Cyclopeptidome in Human Gut and Other Environments.
B Behsaz, H Mohimani, AA Gurevich, AD Prjibelski, MF Fisher, L Smarr, ...
RECOMB, 289-291, 2019
22019
Metarippquest: a peptidogenomics approach for the discovery of ribosomally synthesized and post-translationally modified peptides
H Mohimani, A Gurevich, KL Alexander, CB Naman, T Leao, E Glukhov, ...
BioRxiv, 227504, 2017
22017
NPS: scoring and evaluating the statistical significance of peptidic natural product–spectrum matches
AM Tagirdzhanov, A Shlemov, A Gurevich
Bioinformatics 35 (14), i315-i323, 2019
2019
TASK DRIVEN CONVERSION OF THE SPADES GENOME ASSEMBLER INTO A FAMILY OF SPADES TOOLS
A Lapidus, A Korobeynikov, D Antipov, A Bankevich, E Bushmanova, ...
Высокопроизводительное секвенирование в геномике, 26-26, 2017
2017
ВЫЧИСЛИТЕЛЬНЫЕ МЕТОДЫ ДЛЯ АНАЛИЗА ПОДВЕРЖЕННЫХ ОШИБКАМ МЕТАБОЛОГЕНОМНЫХ ДАННЫХ
АА Гуревич
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Статьи 1–20