Kami Ahmad

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Steven HenikoffBasic Sciences Division, Fred Hutchinson Cancer Research CenterVerified email at fhcrc.org
Jay SarthyActing Assistant Professor, University of Washington and Research Associate, Fred Hutchinson Cancer Research CenterVerified email at fredhutch.org
Harmit Singh MalikMember, Basic Sciences, Fred Hutchinson Cancer Research CenterVerified email at fhcrc.org
Michael P MeersWashington University School of Medicine in St. LouisVerified email at wustl.edu
Brian SchwartzCamp4 TherapeuticsVerified email at camp4tx.com
Ye ZhengFred Hutchison Cancer CenterVerified email at fredhutch.org
Kent GolicProfessor, School of Biological Sciences, University of UtahVerified email at biology.utah.edu
Srinivas RamachandranAssistant Professor, University of Colorado School of MedicineVerified email at ucdenver.edu
Siva KasinathanStanford UniversityVerified email at stanford.edu
Scott FurlanFred Hutchinson Cancer Research CenterVerified email at fredhutch.org
Gabriel E. ZentnerAssociate Director of Computational Genomics, eGenesisVerified email at egenesisbio.com
Manolis KellisProfessor of Computer Science, MIT and Broad InstituteVerified email at mit.edu
Kevin P. WhiteNational University of Singapore, A*STARVerified email at nus.edu.sg
Lincoln SteinDirector of Informatics and Biocomputing, Ontario Institute for Cancer Research Verified email at oicr.on.ca
Bas van SteenselNetherlands Cancer InstituteVerified email at nki.nl
Oliver RandoProfessor of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical SchoolVerified email at umassmed.edu
Hatice S Kaya-OkurAltius Scholar at Altius Institute for Biomedical Sciences

Kami Ahmad

Fred Hutchinson Cancer Research Center

Verified email at fredhutch.org

epigenetics


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CUT&Tag for efficient epigenomic profiling of small samples and single cells HS Kaya-Okur, SJ Wu, CA Codomo, ES Pledger, TD Bryson, JG Henikoff, ... Nature communications 10 (1), 1930, 2019	1468	2019
The histone variant H3. 3 marks active chromatin by replication-independent nucleosome assembly K Ahmad, S Henikoff Molecular cell 9 (6), 1191-1200, 2002	1468	2002
The centromere paradox: stable inheritance with rapidly evolving DNA S Henikoff, K Ahmad, HS Malik Science 293 (5532), 1098-1102, 2001	1385	2001
Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE modENCODE Consortium, S Roy, J Ernst, PV Kharchenko, P Kheradpour, ... Science 330 (6012), 1787-1797, 2010	1087	2010
Histone H3. 3 is enriched in covalent modifications associated with active chromatin E McKittrick, PR Gafken, K Ahmad, S Henikoff Proceedings of the National Academy of Sciences 101 (6), 1525-1530, 2004	628	2004
Histone H3 variants specify modes of chromatin assembly K Ahmad, S Henikoff Proceedings of the National Academy of Sciences 99 (suppl_4), 16477-16484, 2002	433	2002
Histone variants, nucleosome assembly and epigenetic inheritance S Henikoff, T Furuyama, K Ahmad Trends in Genetics 20 (7), 320-326, 2004	412	2004
Assembly of variant histones into chromatin S Henikoff, K Ahmad Annu. Rev. Cell Dev. Biol. 21 (1), 133-153, 2005	408	2005
Transcriptional activation triggers deposition and removal of the histone variant H3. 3 BE Schwartz, K Ahmad Genes & development 19 (7), 804-814, 2005	406	2005
A Comprehensive Map of Insulator Elements for the Drosophila Genome N Nègre, CD Brown, PK Shah, P Kheradpour, CA Morrison, JG Henikoff, ... PLoS genetics 6 (1), e1000814, 2010	373	2010
Heterochromatic deposition of centromeric histone H3-like proteins S Henikoff, K Ahmad, JS Platero, B van Steensel Proceedings of the National Academy of Sciences 97 (2), 716-721, 2000	372	2000
A unified phylogeny-based nomenclature for histone variants PB Talbert, K Ahmad, G Almouzni, J Ausió, F Berger, PL Bhalla, ... Epigenetics & chromatin 5, 1-19, 2012	364	2012
A histone-H3-like protein in C. elegans BJ Buchwitz, K Ahmad, LL Moore, MB Roth, S Henikoff Nature 401 (6753), 547-548, 1999	315	1999
Genome-wide profiling of salt fractions maps physical properties of chromatin S Henikoff, JG Henikoff, A Sakai, GB Loeb, K Ahmad Genome research 19 (3), 460-469, 2009	281	2009
Efficient low-cost chromatin profiling with CUT&Tag HS Kaya-Okur, DH Janssens, JG Henikoff, K Ahmad, S Henikoff Nature protocols 15 (10), 3264-3283, 2020	255	2020
High-resolution mapping of transcription factor binding sites on native chromatin S Kasinathan, GA Orsi, GE Zentner, K Ahmad, S Henikoff Nature methods 11 (2), 203-209, 2014	206	2014
Transcriptional and developmental functions of the H3. 3 histone variant in Drosophila A Sakai, BE Schwartz, S Goldstein, K Ahmad Current Biology 19 (21), 1816-1820, 2009	196	2009
Centromeres are specialized replication domains in heterochromatin K Ahmad, S Henikoff The Journal of cell biology 153 (1), 101-110, 2001	188	2001
Maintenance of chromatin states: an open-and-shut case D Vermaak, K Ahmad, S Henikoff Current opinion in cell biology 15 (3), 266-274, 2003	179	2003
Modulation of a transcription factor counteracts heterochromatic gene silencing in Drosophila K Ahmad, S Henikoff Cell 104 (6), 839-847, 2001	179	2001

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