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Jana Sperschneider
Jana Sperschneider
Senior Research Scientist - CSIRO
Подтвержден адрес электронной почты в домене csiro.au - Главная страница
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Процитировано
Год
EffectorP: predicting fungal effector proteins from secretomes using machine learning
J Sperschneider, DM Gardiner, PN Dodds, F Tini, L Covarelli, KB Singh, ...
New Phytologist 210 (2), 743-761, 2016
4122016
LOCALIZER: subcellular localization prediction of both plant and effector proteins in the plant cell
J Sperschneider, AM Catanzariti, K DeBoer, B Petre, DM Gardiner, ...
Scientific reports 7 (1), 44598, 2017
3822017
Improved prediction of fungal effector proteins from secretomes with EffectorP 2.0
J Sperschneider, PN Dodds, DM Gardiner, KB Singh, JM Taylor
Molecular plant pathology 19 (9), 2094-2110, 2018
3712018
EffectorP 3.0: prediction of apoplastic and cytoplasmic effectors in fungi and oomycetes
J Sperschneider, PN Dodds
Molecular plant-microbe interactions 35 (2), 146-156, 2022
2892022
Loss of AvrSr50 by somatic exchange in stem rust leads to virulence for Sr50 resistance in wheat
J Chen, NM Upadhyaya, D Ortiz, J Sperschneider, F Li, C Bouton, ...
Science 358 (6370), 1607-1610, 2017
2172017
Advances and challenges in computational prediction of effectors from plant pathogenic fungi
J Sperschneider, PN Dodds, DM Gardiner, JM Manners, KB Singh, ...
PLoS pathogens 11 (5), e1004806, 2015
1942015
Genome Sequencing and Comparative Genomics of the Broad Host-Range Pathogen Rhizoctonia solani AG8
JK Hane, JP Anderson, AH Williams, J Sperschneider, KB Singh
PLoS genetics 10 (5), e1004281, 2014
1882014
ApoplastP: prediction of effectors and plant proteins in the apoplast using machine learning
J Sperschneider, PN Dodds, KB Singh, JM Taylor
New Phytologist 217 (4), 1764-1778, 2018
1822018
Emergence of the Ug99 lineage of the wheat stem rust pathogen through somatic hybridisation
F Li, NM Upadhyaya, J Sperschneider, O Matny, H Nguyen-Phuc, R Mago, ...
Nature communications 10 (1), 5068, 2019
1462019
Comparative genomics and prediction of conditionally dispensable sequences in legume–infecting Fusarium oxysporum formae speciales facilitates identification …
AH Williams, M Sharma, LF Thatcher, S Azam, JK Hane, J Sperschneider, ...
BMC genomics 17, 1-24, 2016
1202016
A Near-Complete Haplotype-Phased Genome of the Dikaryotic Wheat Stripe Rust Fungus Puccinia striiformis f. sp. tritici Reveals High Interhaplotype Diversity
B Schwessinger, J Sperschneider, WS Cuddy, DP Garnica, ME Miller, ...
MBio 9 (1), 10.1128/mbio. 02275-17, 2018
1072018
DotKnot: pseudoknot prediction using the probability dot plot under a refined energy model
J Sperschneider, A Datta
Nucleic acids research 38 (7), e103-e103, 2010
1042010
Genome-Wide Analysis in Three Fusarium Pathogens Identifies Rapidly Evolving Chromosomes and Genes Associated with Pathogenicity
J Sperschneider, DM Gardiner, LF Thatcher, R Lyons, KB Singh, ...
Genome biology and evolution 7 (6), 1613-1627, 2015
952015
Genomics accelerated isolation of a new stem rust avirulence gene–wheat resistance gene pair
NM Upadhyaya, R Mago, V Panwar, T Hewitt, M Luo, J Chen, ...
Nature Plants 7 (9), 1220-1228, 2021
912021
Comparative genomics of Australian isolates of the wheat stem rust pathogen Puccinia graminis f. sp. tritici reveals extensive polymorphism in candidate effector …
NM Upadhyaya, DP Garnica, H Karaoglu, J Sperschneider, A Nemri, B Xu, ...
Frontiers in plant science 5, 759, 2015
902015
Machine learning in plant–pathogen interactions: empowering biological predictions from field scale to genome scale
J Sperschneider
New Phytologist 228 (1), 35-41, 2020
762020
Evaluation of secretion prediction highlights differing approaches needed for oomycete and fungal effectors
J Sperschneider, AH Williams, JK Hane, KB Singh, JM Taylor
Frontiers in plant science 6, 1168, 2015
722015
Comparative secretome analysis of Rhizoctonia solani isolates with different host ranges reveals unique secretomes and cell death inducing effectors
JP Anderson, J Sperschneider, J Win, B Kidd, K Yoshida, J Hane, ...
Scientific reports 7 (1), 10410, 2017
652017
Changing the Game: Using Integrative Genomics to Probe Virulence Mechanisms of the Stem Rust Pathogen Puccinia graminis f. sp. tritici
M Figueroa, NM Upadhyaya, J Sperschneider, RF Park, LJ Szabo, ...
Frontiers in Plant Science 7, 205, 2016
602016
Diversifying selection in the wheat stem rust fungus acts predominantly on pathogen-associated gene families and reveals candidate effectors
J Sperschneider, H Ying, PN Dodds, DM Gardiner, NM Upadhyaya, ...
Frontiers in plant science 5, 372, 2014
602014
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