| TCGAbiolinks: an R/Bioconductor package for integrative analysis of TCGA data A Colaprico, TC Silva, C Olsen, L Garofano, C Cava, D Garolini, ... Nucleic acids research 44 (8), e71-e71, 2016 | 1506 | 2016 |
| Molecular profiling reveals biologically discrete subsets and pathways of progression in diffuse glioma M Ceccarelli, FP Barthel, TM Malta, TS Sabedot, SR Salama, BA Murray, ... Cell 164 (3), 550-563, 2016 | 1464 | 2016 |
| Transforming fusions of FGFR and TACC genes in human glioblastoma D Singh, JM Chan, P Zoppoli, F Niola, R Sullivan, A Castano, EM Liu, ... Science 337 (6099), 1231-1235, 2012 | 670 | 2012 |
| RNA-Seq signatures normalized by mRNA abundance allow absolute deconvolution of human immune cell types G Monaco, B Lee, W Xu, S Mustafah, YY Hwang, C Carré, N Burdin, ... Cell reports 26 (6), 1627-1640. e7, 2019 | 297 | 2019 |
| TimeDelay-ARACNE: Reverse engineering of gene networks from time-course data by an information theoretic approach P Zoppoli, S Morganella, M Ceccarelli BMC bioinformatics 11 (1), 1-15, 2010 | 280 | 2010 |
| Evolution of metastases in space and time under immune selection M Angelova, B Mlecnik, A Vasaturo, G Bindea, T Fredriksen, L Lafontaine, ... Cell 175 (3), 751-765. e16, 2018 | 244 | 2018 |
| Multivariate indicator Kriging approach using a GIS to classify soil degradation for Mediterranean agricultural lands N Diodato, M Ceccarelli Ecological Indicators 4 (3), 177-187, 2004 | 160 | 2004 |
| Upregulation of miR-21 by Ras in vivo and its role in tumor growth D Frezzetti, M De Menna, P Zoppoli, C Guerra, A Ferraro, AM Bello, ... Oncogene 30 (3), 275-286, 2011 | 158 | 2011 |
| TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages TC Silva, A Colaprico, C Olsen, F D'Angelo, G Bontempi, M Ceccarelli, ... F1000Research 5, 2016 | 137 | 2016 |
| Signaling networks associated with AKT activation in non-small cell lung cancer (NSCLC): new insights on the role of phosphatydil-inositol-3 kinase M Scrima, C De Marco, F Fabiani, R Franco, G Pirozzi, G Rocco, M Ravo, ... PloS one 7 (2), e30427, 2012 | 128 | 2012 |
| Interpolation processes using multivariate geostatistics for mapping of climatological precipitation mean in the Sannio Mountains (southern Italy) N Diodato, M Ceccarelli Earth Surface Processes and Landforms: The Journal of the British …, 2005 | 120 | 2005 |
| Learning gene regulatory networks from only positive and unlabeled data L Cerulo, C Elkan, M Ceccarelli BMC bioinformatics 11 (1), 1-16, 2010 | 119 | 2010 |
| The molecular landscape of glioma in patients with Neurofibromatosis 1 F D’Angelo, M Ceccarelli, L Garofano, J Zhang, V Frattini, FP Caruso, ... Nature medicine 25 (1), 176-187, 2019 | 114 | 2019 |
| Single-cell transcriptome analysis of lineage diversity in high-grade glioma J Yuan, HM Levitin, V Frattini, EC Bush, DM Boyett, J Samanamud, ... Genome medicine 10 (1), 1-15, 2018 | 111 | 2018 |
| Identification of genetic determinants of breast cancer immune phenotypes by integrative genome-scale analysis W Hendrickx, I Simeone, S Anjum, Y Mokrab, F Bertucci, P Finetti, ... Oncoimmunology 6 (2), e1253654, 2017 | 111 | 2017 |
| A metabolic function of FGFR3-TACC3 gene fusions in cancer V Frattini, SM Pagnotta, JJ Fan, MV Russo, SB Lee, L Garofano, J Zhang, ... Nature 553 (7687), 222-227, 2018 | 98 | 2018 |
| Proteogenomic and metabolomic characterization of human glioblastoma LB Wang, A Karpova, MA Gritsenko, JE Kyle, S Cao, Y Li, D Rykunov, ... Cancer Cell, 2021 | 96 | 2021 |
| UHRF1 coordinates peroxisome proliferator activated receptor gamma (PPARG) epigenetic silencing and mediates colorectal cancer progression L Sabatino, A Fucci, M Pancione, V Carafa, A Nebbioso, C Pistore, ... Oncogene, 2012 | 90 | 2012 |
| Immune escape mechanisms in colorectal cancer pathogenesis and liver metastasis M Pancione, G Giordano, A Remo, A Febbraro, L Sabatino, E Manfrin, ... Journal of immunology research 2014, 2014 | 85 | 2014 |
| TRAF7 protein promotes Lys-29-linked polyubiquitination of IκB kinase (IKKγ)/NF-κB essential modulator (NEMO) and p65/RelA protein and represses NF-κB activation T Zotti, A Uva, A Ferravante, M Vessichelli, I Scudiero, M Ceccarelli, P Vito Journal of Biological Chemistry 286 (26), 22924, 2011 | 80 | 2011 |
