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Andrej Savol
Andrej Savol
Foundation Medicine, Inc.
Verified email at foundationmedicine.com
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Cited by
Cited by
Year
Macrophages facilitate electrical conduction in the heart
M Hulsmans, S Clauss, L Xiao, AD Aguirre, KR King, A Hanley, ...
Cell 169 (3), 510-522. e20, 2017
8172017
IRF3 and type I interferons fuel a fatal response to myocardial infarction
KR King, AD Aguirre, YX Ye, Y Sun, JD Roh, RP Ng Jr, RH Kohler, ...
Nature medicine 23 (12), 1481-1487, 2017
4042017
Prolonged Mek1/2 suppression impairs the developmental potential of embryonic stem cells
J Choi, AJ Huebner, K Clement, RM Walsh, A Savol, K Lin, H Gu, ...
Nature 548 (7666), 219-223, 2017
2492017
Mutation of a nucleosome compaction region disrupts Polycomb-mediated axial patterning
MS Lau, MG Schwartz, S Kundu, AJ Savol, PI Wang, SK Marr, DJ Grau, ...
Science 355 (6329), 1081-1084, 2017
1382017
Protein conformational populations and functionally relevant substates
A Ramanathan, A Savol, V Burger, CS Chennubhotla, PK Agarwal
Accounts of chemical research 47 (1), 149-156, 2014
1092014
Discovering conformational sub-states relevant to protein function
A Ramanathan, A Savol, P Agarwal, CS Chennubhotla
Biophysical Journal 100 (3), 172a, 2011
822011
DUSP9 modulates DNA hypomethylation in female mouse pluripotent stem cells
J Choi, K Clement, AJ Huebner, J Webster, CM Rose, J Brumbaugh, ...
Cell stem cell 20 (5), 706-719. e7, 2017
752017
Survival in quiescence requires the euchromatic deployment of Clr4/SUV39H by argonaute-associated small RNAs
RI Joh, JS Khanduja, IA Calvo, M Mistry, CM Palmieri, AJ Savol, SJH Sui, ...
Molecular cell 64 (6), 1088-1101, 2016
332016
Modeling boundary conditions for balanced proliferation in metastatic latency
DP Taylor, JZ Wells, A Savol, C Chennubhotla, A Wells
Clinical Cancer Research 19 (5), 1063-1070, 2013
332013
Event detection and sub‐state discovery from biomolecular simulations using higher‐order statistics: Application to enzyme adenylate kinase
A Ramanathan, AJ Savol, PK Agarwal, CS Chennubhotla
Proteins: Structure, Function, and Bioinformatics 80 (11), 2536-2551, 2012
332012
QAARM: quasi-anharmonic autoregressive model reveals molecular recognition pathways in ubiquitin
AJ Savol, VM Burger, PK Agarwal, A Ramanathan, CS Chennubhotla
Bioinformatics 27 (13), i52-i60, 2011
232011
Quasi-anharmonic analysis reveals intermediate States in the nuclear co-activator receptor binding domain ensemble
VM Burger, A Ramanathan, AJ Savol, CB Stanley, PK Agarwal, ...
Biocomputing 2012, 70-81, 2012
132012
Genome-wide identification of autosomal genes with allelic imbalance of chromatin state
AJ Savol, PI Wang, Y Jeon, D Colognori, E Yildirim, SF Pinter, B Payer, ...
PloS one 12 (8), e0182568, 2017
92017
Quantifying the sources of kinetic frustration in folding simulations of small proteins
AJ Savol, CS Chennubhotla
Journal of Chemical Theory and Computation 10 (8), 2964-2974, 2014
92014
Astrocytes in the optic nerve are heterogeneous in their reactivity to glaucomatous injury
Y Zhu, R Wang, AC Pappas, P Seifert, A Savol, RI Sadreyev, D Sun, ...
Cells 12 (17), 2131, 2023
32023
Approximating frustration scores in complex networks via perturbed Laplacian spectra
AJ Savol, CS Chennubhotla
Physical Review E 92 (6), 062806, 2015
12015
QUASI-ANHARMONIC ANALYSIS REVEALS INTERMEDIATE STATES IN THE NUCLEAR CO-ACTIVATOR RECEPTOR BINDING DOMAIN ENSEMBLE. In: Biocomputing 2012
VM BURGER, A RAMANATHAN, AJ SAVOL, CB STANLEY, ...
Oak Ridge National Lab.(ORNL), Oak Ridge, TN (United States). Oak Ridge …, 2011
12011
Analytical Validation (Accuracy, Reproducibility, Limit of Detection) of FoundationOne RNA Assay for Fusion Detection in 189 Clinical Tumor Specimens
D Sun, J He, W Jeck, L Albacker, C Cui, M Datto, M Green, C Guo, ...
JOURNAL OF MOLECULAR DIAGNOSTICS 25 (11), S145-S145, 2023
2023
Improved RNA Extraction and Sequencing from Clinical FFPE Specimens Using Mineral Oil
JK Killian, J Ross, J Elvin, L Albacker, JA Vergilio, N Ngo, S Ramkissoon, ...
LABORATORY INVESTIGATION 99, 2019
2019
Ultrastructural and transcriptional changes in aging and glaucomatous murine optic nerve heads
Y Zhu, A Pappas, R Wang, P Seifert, A Savol, R Sadreyev, D Sun, ...
Investigative Ophthalmology & Visual Science 59 (9), 2008-2008, 2018
2018
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