| A biological named entity recognizer M Narayanaswamy, KE Ravikumar, K Vijay-Shanker Biocomputing 2003, 427-438, 2002 | 169 | 2002 |
| The CHEMDNER corpus of chemicals and drugs and its annotation principles M Krallinger, O Rabal, F Leitner, M Vazquez, D Salgado, Z Lu, R Leaman, ... Journal of cheminformatics 7 (1), 1-17, 2015 | 153 | 2015 |
| Literature mining and database annotation of protein phosphorylation using a rule-based system ZZ Hu, M Narayanaswamy, KE Ravikumar, K Vijay-Shanker, CH Wu Bioinformatics 21 (11), 2759-2765, 2005 | 116 | 2005 |
| An information extraction framework for cohort identification using electronic health records H Liu, SJ Bielinski, S Sohn, S Murphy, KB Wagholikar, SR Jonnalagadda, ... AMIA Summits on Translational Science Proceedings 2013, 149, 2013 | 98 | 2013 |
| Beyond the clause: extraction of phosphorylation information from medline abstracts M Narayanaswamy, KE Ravikumar, K Vijay-Shanker Bioinformatics 21 (suppl_1), i319-i327, 2005 | 60 | 2005 |
| Comprehensive temporal information detection from clinical text: medical events, time, and TLINK identification S Sohn, KB Wagholikar, D Li, SR Jonnalagadda, C Tao, ... Journal of the American Medical Informatics Association 20 (5), 836-842, 2013 | 54 | 2013 |
| Comprehensive temporal information detection from clinical text: medical events, time, and TLINK identification S Sohn, KB Wagholikar, D Li, SR Jonnalagadda, C Tao, ... Journal of the American Medical Informatics Association 20 (5), 836-842, 2013 | 54 | 2013 |
| Toward a learning health-care system–knowledge delivery at the point of care empowered by big data and NLP VC Kaggal, RK Elayavilli, S Mehrabi, JJ Pankratz, S Sohn, Y Wang, D Li, ... Biomedical informatics insights 8, BII. S37977, 2016 | 50 | 2016 |
| Automated chart review for asthma cohort identification using natural language processing: an exploratory study ST Wu, S Sohn, KE Ravikumar, K Wagholikar, SR Jonnalagadda, H Liu, ... Annals of Allergy, Asthma & Immunology 111 (5), 364-369, 2013 | 48 | 2013 |
| Text mining facilitates database curation - extraction of mutation-disease associations from Bio-medical literature. KE Ravikumar, KB Wagholikar, D Li, JP Kocher, H Liu BMC Bioinformatics 16 (1), 185, 2015 | 42* | 2015 |
| Literature mining of protein-residue associations with graph rules learned through distant supervision KE Ravikumar, H Liu, JD Cohn, ME Wall, K Verspoor Journal of biomedical semantics 3 (3), 1-23, 2012 | 42 | 2012 |
| From graphs to events: A subgraph matching approach for information extraction from biomedical text H Liu, R Komandur, K Verspoor Proceedings of BioNLP Shared Task 2011 Workshop, 164-172, 2011 | 42 | 2011 |
| Diverting intracellular trafficking of Salmonella to the lysosome through activation of the late endocytic Rab7 by intracellular delivery of muramyl dipeptide K Mukherjee, S Parashuraman, G Krishnamurthy, J Majumdar, A Yadav, ... Journal of cell science 115 (18), 3693-3701, 2002 | 39 | 2002 |
| An online literature mining tool for protein phosphorylation X Yuan, ZZ Hu, HT Wu, M Torii, M Narayanaswamy, KE Ravikumar, ... Bioinformatics 22 (13), 1668-1669, 2006 | 37 | 2006 |
| Detecting signals in noisy data-can ensemble classifiers help identify adverse drug reaction in tweets M Rastegar-Mojarad, RK Elayavilli, Y Yu, H Liu Proceedings of the Social Media Mining Shared Task Workshop at the Pacific …, 2016 | 30 | 2016 |
| Text mining improves prediction of protein functional sites KM Verspoor, JD Cohn, KE Ravikumar, ME Wall PloS one 7 (2), e32171, 2012 | 30 | 2012 |
| A new method for prioritizing drug repositioning candidates extracted by literature-based discovery M Rastegar-Mojarad, RK Elayavilli, D Li, R Prasad, H Liu 2015 IEEE international conference on Bioinformatics and Biomedicine (BIBM …, 2015 | 27 | 2015 |
| BELMiner: adapting a rule-based relation extraction system to extract biological expression language statements from bio-medical literature evidence sentences KE Ravikumar, M Rastegar-Mojarad, H Liu Database 2017, 2017 | 26 | 2017 |
| Extracting chemical–protein relations using attention-based neural networks S Liu, F Shen, R Komandur Elayavilli, Y Wang, M Rastegar-Mojarad, ... Database 2018, 2018 | 17 | 2018 |
| Effect of a novel clinical decision support tool on the efficiency and accuracy of treatment recommendations for cholesterol management MR Scheitel, ME Kessler, JL Shellum, SG Peters, DS Milliner, H Liu, ... Applied clinical informatics 8 (1), 124, 2017 | 17 | 2017 |
Hongfang LiuProfessor of Biomedical Informatics, Mayo ClinicVerified email at mayo.edu
