| The complete genome sequence of the Gram-positive bacterium Bacillus subtilis F Kunst, N Ogasawara, I Moszer, AM Albertini, GO Alloni, V Azevedo, ... Nature 390 (6657), 249-256, 1997 | 4673 | 1997 |
| Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ... Nature biotechnology 35 (8), 725-731, 2017 | 1133 | 2017 |
| Assembling single-cell genomes and mini-metagenomes from chimeric MDA products S Nurk, A Bankevich, D Antipov, AA Gurevich, A Korobeynikov, A Lapidus, ... Journal of Computational Biology 20 (10), 714-737, 2013 | 1069 | 2013 |
| A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea D Wu, P Hugenholtz, K Mavromatis, R Pukall, E Dalin, NN Ivanova, ... Nature 462 (7276), 1056-1060, 2009 | 1052 | 2009 |
| Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis N Ivanova, A Sorokin, I Anderson, N Galleron, B Candelon, V Kapatral, ... Nature 423 (6935), 87-91, 2003 | 973 | 2003 |
| The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome DA Sela, J Chapman, A Adeuya, JH Kim, F Chen, TR Whitehead, ... Proceedings of the National Academy of Sciences 105 (48), 18964-18969, 2008 | 906 | 2008 |
| Assembling genomes and mini-metagenomes from highly chimeric reads S Nurk, A Bankevich, D Antipov, A Gurevich, A Korobeynikov, A Lapidus, ... Research in Computational Molecular Biology: 17th Annual International …, 2013 | 729 | 2013 |
| The Wolbachia Genome of Brugia malayi: Endosymbiont Evolution within a Human Pathogenic Nematode J Foster, M Ganatra, I Kamal, J Ware, K Makarova, N Ivanova, ... PLoS biology 3 (4), e121, 2005 | 687 | 2005 |
| The genomic basis of trophic strategy in marine bacteria FM Lauro, D McDougald, T Thomas, TJ Williams, S Egan, S Rice, ... Proceedings of the National Academy of Sciences 106 (37), 15527-15533, 2009 | 676 | 2009 |
| Using SPAdes de novo assembler A Prjibelski, D Antipov, D Meleshko, A Lapidus, A Korobeynikov Current protocols in bioinformatics 70 (1), e102, 2020 | 635 | 2020 |
| Genome sequencing reveals complex secondary metabolome in the marine actinomycete Salinispora tropica DW Udwary, L Zeigler, RN Asolkar, V Singan, A Lapidus, W Fenical, ... Proceedings of the National Academy of Sciences 104 (25), 10376-10381, 2007 | 614 | 2007 |
| Complete sequence and comparative genome analysis of the dairy bacterium Streptococcus thermophilus A Bolotin, B Quinquis, P Renault, A Sorokin, SD Ehrlich, S Kulakauskas, ... Nature biotechnology 22 (12), 1554-1558, 2004 | 608 | 2004 |
| The plant cell wall–decomposing machinery underlies the functional diversity of forest fungi DC Eastwood, D Floudas, M Binder, A Majcherczyk, P Schneider, A Aerts, ... Science 333 (6043), 762-765, 2011 | 586 | 2011 |
| Patterns and Implications of Gene Gain and Loss in the Evolution of Prochlorococcus GC Kettler, AC Martiny, K Huang, J Zucker, ML Coleman, S Rodrigue, ... PLoS genetics 3 (12), e231, 2007 | 560 | 2007 |
| A bioinformatician's guide to metagenomics V Kunin, A Copeland, A Lapidus, K Mavromatis, P Hugenholtz Microbiology and molecular biology reviews 72 (4), 557-578, 2008 | 549 | 2008 |
| Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000 H Feil, WS Feil, P Chain, F Larimer, G DiBartolo, A Copeland, A Lykidis, ... Proceedings of the National Academy of Sciences 102 (31), 11064-11069, 2005 | 523 | 2005 |
| Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillusspecies MW Rey, P Ramaiya, BA Nelson, SD Brody-Karpin, EJ Zaretsky, M Tang, ... Genome biology 5 (10), 1-12, 2004 | 512 | 2004 |
| Living with genome instability: the adaptation of phytoplasmas to diverse environments of their insect and plant hosts X Bai, J Zhang, A Ewing, SA Miller, A Jancso Radek, DV Shevchenko, ... Journal of bacteriology 188 (10), 3682-3696, 2006 | 508 | 2006 |
| Environmental genomics reveals a single-species ecosystem deep within Earth D Chivian, EL Brodie, EJ Alm, DE Culley, PS Dehal, TZ DeSantis, ... Science 322 (5899), 275-278, 2008 | 494 | 2008 |
| Genome project standards in a new era of sequencing PSG Chain, DV Grafham, RS Fulton, MG Fitzgerald, J Hostetler, D Muzny, ... Science 326 (5950), 236-237, 2009 | 454 | 2009 |
Nikos C KyrpidesJoint Genome Institute, Lawrence Berkeley National LaboratoryVerified email at lbl.gov
