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Julia Chifman
Julia Chifman
Assistant Professor, Department of Mathematics and Statistics, American University
Подтвержден адрес электронной почты в домене american.edu - Главная страница
Название
Процитировано
Процитировано
Год
Quartet inference from SNP data under the coalescent model
J Chifman, L Kubatko
Bioinformatics 30 (23), 3317-3324, 2014
10662014
Identifiability of the unrooted species tree topology under the coalescent model with time-reversible substitution processes, site-specific rate variation, and invariable sites
J Chifman, L Kubatko
Journal of theoretical biology 374, 35-47, 2015
2582015
HyDe: a Python package for genome-scale hybridization detection
PD Blischak, J Chifman, AD Wolfe, LS Kubatko
Systematic Biology 67 (5), 821-829, 2018
1962018
A systems biology approach to iron metabolism
J Chifman, R Laubenbacher, SV Torti
A Systems Biology Approach to Blood, 201-225, 2014
1852014
Immunogenic subtypes of breast cancer delineated by gene classifiers of immune responsiveness
LD Miller, JA Chou, MA Black, C Print, J Chifman, A Alistar, T Putti, X Zhou, ...
Cancer immunology research 4 (7), 600-610, 2016
982016
Conservation of immune gene signatures in solid tumors and prognostic implications
J Chifman, A Pullikuth, JW Chou, D Bedognetti, LD Miller
Bmc Cancer 16, 1-17, 2016
722016
An invariants-based method for efficient identification of hybrid species from large-scale genomic data
LS Kubatko, J Chifman
BMC evolutionary biology 19, 1-13, 2019
692019
The core control system of intracellular iron homeostasis: a mathematical model
J Chifman, A Kniss, P Neupane, I Williams, B Leung, Z Deng, P Mendes, ...
Journal of theoretical biology 300, 91-99, 2012
412012
Activated oncogenic pathway modifies iron network in breast epithelial cells: a dynamic modeling perspective
J Chifman, S Arat, Z Deng, E Lemler, JC Pino, LA Harris, MA Kochen, ...
PLoS computational biology 13 (2), e1005352, 2017
252017
Toric Ideals of Phylogenetic Invariants for the General Group-Based Model on Claw Trees K 1,n
J Chifman, S Petrović
Algebraic Biology: Second International Conference, AB 2007, Castle of …, 2007
202007
Bulk and single-cell profiling of breast tumors identifies TREM-1 as a dominant immune suppressive marker associated with poor outcomes
AK Pullikuth, ED Routh, KD Zimmerman, J Chifman, JW Chou, MH Soike, ...
Frontiers in Oncology 11, 734959, 2021
122021
Transcriptomic features of T cell-barren tumors are conserved across diverse tumor types
ED Routh, AK Pullikuth, G Jin, J Chifman, JW Chou, RB D'Agostino Jr, ...
Frontiers in Immunology 11, 57, 2020
102020
Note on direct products of certain classes of finite groups
J Chifman
Communications in Algebra 37 (5), 1831-1842, 2009
72009
Identifiability of speciation times under the multispecies coalescent
L Kubatko, A Leonard, J Chifman
BioRxiv, 2020.11. 24.396424, 2020
62020
A phylogenetic approach to inferring the order in which mutations arise during cancer progression
Y Gao, J Gaither, J Chifman, L Kubatko
PLOS Computational Biology 18 (12), e1010560, 2022
52022
SteadyCellPhenotype: a web-based tool for the modeling of biological networks with ternary logic
AC Knapp, L Sordo Vieira, R Laubenbacher, J Chifman
Bioinformatics 38 (8), 2369-2370, 2022
22022
Immune gene signatures and tumor intrinsic markers delineate novel immunogenic subtypes of breast cancer
LD Miller, JW Chou, MA Black, CG Print, E Jimenez, J Chifman, A Alistar, ...
Journal for ImmunoTherapy of Cancer 2, 1-3, 2014
22014
Assessing how macrophages attain distinct iron handling phenotypes in a tumor via a mathematical model
LS Vieira, J Masison, J Adams, S Torti, R Laubenbacher, J Chifman
Cancer Research 79 (13_Supplement), 2442-2442, 2019
12019
Triggering receptor expressed in myeloid cells 1 (TREM1) is a predictive marker for breast cancer therapeutics
AK Pullikuth, J Chifman, ED Routh, J Chou, G Jin, MA Black, LD Miller
Cancer Research 78 (13_Supplement), 3791-3791, 2018
12018
HyDe: a Python Package for Genome-Scale Hybridization
PD BLISCHAK, J CHIFMAN, AD WOLFE, LS KUBATKO
12018
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Статьи 1–20