PyIgClassify: a database of antibody CDR structural classifications J Adolf-Bryfogle, Q Xu, B North, A Lehmann, RL Dunbrack Jr Nucleic acids research 43 (D1), D432-D438, 2015 | 134 | 2015 |
Statistical analysis of interface similarity in crystals of homologous proteins Q Xu, AA Canutescu, G Wang, M Shapovalov, Z Obradovic, ... Journal of molecular biology 381 (2), 487-507, 2008 | 131 | 2008 |
The protein common interface database (ProtCID)—a comprehensive database of interactions of homologous proteins in multiple crystal forms Q Xu, RL Dunbrack Nucleic acids research 39 (suppl_1), D761-D770, 2010 | 91 | 2010 |
Assignment of protein sequences to existing domain and family classification systems: Pfam and the PDB Q Xu, RL Dunbrack Jr Bioinformatics 28 (21), 2763-2772, 2012 | 74 | 2012 |
ProtBuD: a database of biological unit structures of protein families and superfamilies Q Xu, A Canutescu, Z Obradovic, RL Dunbrack Jr Bioinformatics 22 (23), 2876-2882, 2006 | 48 | 2006 |
ProtCID: a data resource for structural information on protein interactions Q Xu, RL Dunbrack Jr Nature communications 11 (1), 711, 2020 | 46 | 2020 |
Identifying three-dimensional structures of autophosphorylation complexes in crystals of protein kinases Q Xu, KL Malecka, L Fink, EJ Jordan, E Duffy, S Kolander, JR Peterson, ... Science signaling 8 (405), rs13-rs13, 2015 | 43 | 2015 |
Assessment of template‐based modeling of protein structure in CASP11 V Modi, Q Xu, S Adhikari, RL Dunbrack Jr Proteins: Structure, Function, and Bioinformatics 84, 200-220, 2016 | 40 | 2016 |
BRCA2, EGFR, and NTRK mutations in mismatch repair-deficient colorectal cancers with MSH2 or MLH1 mutations S Deihimi, A Lev, M Slifker, E Shagisultanova, Q Xu, K Jung, ... Oncotarget 8 (25), 39945, 2017 | 29 | 2017 |
Prediction of phenotypes of missense mutations in human proteins from biological assemblies Q Wei, Q Xu, RL Dunbrack Jr Proteins: Structure, Function, and Bioinformatics 81 (2), 199-213, 2013 | 26 | 2013 |
PP2A/B55α substrate recruitment as defined by the retinoblastoma-related protein p107 H Fowle, Z Zhao, Q Xu, JS Wasserman, X Wang, M Adeyemi, F Feiser, ... Elife 10, e63181, 2021 | 25 | 2021 |
Principles and characteristics of biological assemblies in experimentally determined protein structures Q Xu, RL Dunbrack Jr Current opinion in structural biology 55, 34-49, 2019 | 24 | 2019 |
An unusually small dimer interface is observed in all available crystal structures of cytosolic sulfotransferases B Weitzner, T Meehan, Q Xu, RL Dunbrack Jr Proteins: Structure, Function, and Bioinformatics 75 (2), 289-295, 2009 | 22 | 2009 |
BioAssemblyModeler (BAM): user-friendly homology modeling of protein homo-and heterooligomers MV Shapovalov, Q Wang, Q Xu, M Andrake, RL Dunbrack Jr PloS one 9 (6), e98309, 2014 | 20 | 2014 |
Benchmarking predictions of allostery in liver pyruvate kinase in CAGI4 Q Xu, Q Tang, P Katsonis, O Lichtarge, D Jones, S Bovo, G Babbi, ... Human Mutation 38 (9), 1123-1131, 2017 | 18 | 2017 |
Assessment of predicted enzymatic activity of α‐N‐acetylglucosaminidase variants of unknown significance for CAGI 2016 WT Clark, L Kasak, C Bakolitsa, Z Hu, G Andreoletti, G Babbi, Y Bromberg, ... Human mutation 40 (9), 1519-1529, 2019 | 17 | 2019 |
Performance of in silico tools for the evaluation of p16INK4a (CDKN2A) variants in CAGI M Carraro, G Minervini, M Giollo, Y Bromberg, E Capriotti, R Casadio, ... Human mutation 38 (9), 1042-1050, 2017 | 16 | 2017 |
Protein modeling to assess the pathogenicity of rare variants of SERPINA1 in patients suspected of having Alpha 1 Antitrypsin Deficiency F Kueppers, MD Andrake, Q Xu, RL Dunbrack, J Kim, CL Sanders BMC Medical Genetics 20, 1-19, 2019 | 14 | 2019 |
Biological function derived from predicted structures in CASP11 PJ Huwe, Q Xu, MV Shapovalov, V Modi, MD Andrake, RL Dunbrack Jr Proteins: Structure, Function, and Bioinformatics 84, 370-391, 2016 | 14 | 2016 |
Improving aerosol retrieval accuracy by integrating AERONET, MISR and MODIS data Q Xu, Z Obradovic, B Han, Y Li, A Braverman, S Vucetic 2005 7th International Conference on Information Fusion 1, 7 pp., 2005 | 13 | 2005 |