Vriend G

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Vincent EijsinkProfessor ved Norges Miljø- og Biovitenskapelige Universitet (NMBU)Verified email at nmbu.no
Chris SanderHarvard Medical School, Broad Institute, Dana-Farber Cancer Institute, Memorial Sloan KetteringVerified email at sanderlab.org
Hanka VenselaarResearcher RadboudumcVerified email at radboudumc.nl
Rob HooftProgramme Manager Data Stewardship at DTLVerified email at dtls.nl
Robbie P. JoostenNetherlands Cancer InstituteVerified email at nki.nl
Sander NabuursLead Pharma Medicine, OssVerified email at leadpharma.com
Eddy ArnoldBoard of Governors and Distinguished Professor of Chemistry and Chemical Biology, Rutgers UniversityVerified email at cabm.rutgers.edu
Geerten W. VuisterProfessor of Structural Biology; University of LeicesterVerified email at le.ac.uk
David Lutje HulsikGyes BVVerified email at gyes.com
M.L. Hekkelmanbioinformaticus, NKIVerified email at nki.nl
Jurgen F. DoreleijersAvans University of Applied SciencesVerified email at avans.nl
John E. JohnsonThe Scripps Research InstituteVerified email at scripps.edu
Wouter G. TouwData Scientist, DSMVerified email at dsm.com
Jens Erik NielsenSenior Vice President, Enzyme, Protein and Strain Engineering Research, NovonesisVerified email at novozymes.com
Christian GilissenRadboud university medical centerVerified email at radboudumc.nl
Joris VeltmanBiosciences Institute, Newcastle University, United KingdomVerified email at newcastle.ac.uk
Vignir IsbergSenior Manager, NovonesisVerified email at vignir.org
David E. GloriamDepartment of Drug Design and Pharmacology, University of CopenhagenVerified email at sund.ku.dk
Bert L. de GrootMax Planck Institute for multidisciplinary sciencesVerified email at gwdg.de
Reinhard SchneiderProf. Bioinformatics, University of Luxembourg, Head of Bioinformatics Core Facility, LuxembourgVerified email at uni.lu

Vriend G

Director BIPS Mindoro Philippines

Verified email at radboudumc.nl - Homepage

Protein structure bioinformatics


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WHAT IF: a molecular modeling and drug design program G Vriend Journal of molecular graphics 8 (1), 52-56, 1990	4532	1990
Errors in protein structures RWW Hooft, G Vriend, C Sander, EE Abola Nature 381 (6580), 272-272, 1996	2692	1996
Structure of a human common cold virus and functional relationship to other picornaviruses MG Rossmann, E Arnold, JW Erickson, EA Frankenberger, JP Griffith, ... Nature 317 (6033), 145-153, 1985	1835	1985
Increasing the precision of comparative models with YASARA NOVA—a self‐parameterizing force field E Krieger, G Koraimann, G Vriend Proteins: Structure, Function, and Bioinformatics 47 (3), 393-402, 2002	1689	2002
YASARA View—molecular graphics for all devices—from smartphones to workstations E Krieger, G Vriend Bioinformatics 30 (20), 2981-2982, 2014	1477	2014
Improving physical realism, stereochemistry, and side‐chain accuracy in homology modeling: Four approaches that performed well in CASP8 E Krieger, K Joo, J Lee, J Lee, S Raman, J Thompson, M Tyka, D Baker, ... Proteins: Structure, Function, and Bioinformatics 77 (S9), 114-122, 2009	1475	2009
Protein structure analysis of mutations causing inheritable diseases. An e-Science approach with life scientist friendly interfaces H Venselaar, TAH Te Beek, RKP Kuipers, ML Hekkelman, G Vriend BMC bioinformatics 11, 1-10, 2010	1116	2010
Making optimal use of empirical energy functions: force‐field parameterization in crystal space E Krieger, T Darden, SB Nabuurs, A Finkelstein, G Vriend Proteins: Structure, Function, and Bioinformatics 57 (4), 678-683, 2004	1007	2004
New ways to boost molecular dynamics simulations E Krieger, G Vriend Journal of computational chemistry 36 (13), 996-1007, 2015	923	2015
A series of PDB-related databanks for everyday needs WG Touw, C Baakman, J Black, TAH Te Beek, E Krieger, RP Joosten, ... Nucleic acids research 43 (D1), D364-D368, 2015	921	2015
A series of PDB related databases for everyday needs RP Joosten, TAH Te Beek, E Krieger, ML Hekkelman, RWW Hooft, ... Nucleic acids research 39 (suppl_1), D411-D419, 2010	878	2010
Human dectin-1 deficiency and mucocutaneous fungal infections B Ferwerda, G Ferwerda, TS Plantinga, JA Willment, AB Van Spriel, ... New England Journal of Medicine 361 (18), 1760-1767, 2009	876	2009
Heterozygous germline mutations in the p53 homolog p63 are the cause of EEC syndrome J Celli, P Duijf, BCJ Hamel, M Bamshad, B Kramer, APT Smits, ... Cell 99 (2), 143-153, 1999	865	1999
PRODRG, a program for generating molecular topologies and unique molecular descriptors from coordinates of small molecules DMF Van Aalten, R Bywater, JBC Findlay, M Hendlich, RWW Hooft, ... Journal of computer-aided molecular design 10, 255-262, 1996	790	1996
Mutations in SMAD3 cause a syndromic form of aortic aneurysms and dissections with early-onset osteoarthritis IMBH van de Laar, RA Oldenburg, G Pals, JW Roos-Hesselink, ... Nature genetics 43 (2), 121-126, 2011	738	2011
A text-mining analysis of the human phenome MA Van Driel, J Bruggeman, G Vriend, HG Brunner, JAM Leunissen European journal of human genetics 14 (5), 535-542, 2006	719	2006
PredictProtein—an open resource for online prediction of protein structural and functional features G Yachdav, E Kloppmann, L Kajan, M Hecht, T Goldberg, T Hamp, ... Nucleic acids research 42 (W1), W337-W343, 2014	699	2014
Conserved role of a complement-like protein in phagocytosis revealed by dsRNA knockout in cultured cells of the mosquito, Anopheles gambiae EA Levashina, LF Moita, S Blandin, G Vriend, M Lagueux, FC Kafatos Cell 104 (5), 709-718, 2001	642	2001
The site of attachment in human rhinovirus 14 for antiviral agents that inhibit uncoating TJ Smith, MJ Kremer, M Luo, G Vriend, E Arnold, G Kamer, MG Rossmann, ... Science 233 (4770), 1286-1293, 1986	595	1986
Rational engineering of enzyme stability VGH Eijsink, A Bjørk, S Gåseidnes, R Sirevåg, B Synstad, B van den Burg, ... Journal of biotechnology 113 (1-3), 105-120, 2004	586	2004

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