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Giuseppe Narzisi
Giuseppe Narzisi
Lead Bioinformatics Scientist, New York Genome Center
Verified email at nygenome.org - Homepage
Title
Cited by
Cited by
Year
The contribution of de novo coding mutations to autism spectrum disorder
I Iossifov, BJ O’roak, SJ Sanders, M Ronemus, N Krumm, D Levy, ...
Nature 515 (7526), 216-221, 2014
25852014
De novo gene disruptions in children on the autistic spectrum
I Iossifov, M Ronemus, D Levy, Z Wang, I Hakker, J Rosenbaum, ...
Neuron 74 (2), 285-299, 2012
16622012
High-coverage whole-genome sequencing of the expanded 1000 Genomes Project cohort including 602 trios
M Byrska-Bishop, US Evani, X Zhao, AO Basile, HJ Abel, AA Regier, ...
Cell 185 (18), 3426-3440. e19, 2022
4612022
Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.)
R Ming, R VanBuren, Y Liu, M Yang, Y Han, LT Li, Q Zhang, MJ Kim, ...
Genome biology 14, 1-11, 2013
3802013
Detection of long repeat expansions from PCR-free whole-genome sequence data
E Dolzhenko, JJ Van Vugt, RJ Shaw, MA Bekritsky, M Van Blitterswijk, ...
Genome research 27 (11), 1895-1903, 2017
3272017
Accurate de novo and transmitted indel detection in exome-capture data using microassembly
G Narzisi, JA O'rawe, I Iossifov, H Fang, Y Lee, Z Wang, Y Wu, GJ Lyon, ...
Nature methods 11 (10), 1033-1036, 2014
2372014
ExpansionHunter: a sequence-graph-based tool to analyze variation in short tandem repeat regions
E Dolzhenko, V Deshpande, F Schlesinger, P Krusche, R Petrovski, ...
Bioinformatics 35 (22), 4754-4756, 2019
2252019
Comparing de novo genome assembly: the long and short of it
G Narzisi, B Mishra
PloS one 6 (4), e19175, 2011
2042011
Reducing INDEL calling errors in whole genome and exome sequencing data
H Fang, Y Wu, G Narzisi, JA ORawe, LTJ Barrón, J Rosenbaum, ...
Genome medicine 6, 1-17, 2014
1952014
A multi-objective evolutionary approach to the protein structure prediction problem
V Cutello, G Narzisi, G Nicosia
Journal of The Royal Society Interface 3 (6), 139-151, 2006
1682006
Clonal selection algorithms: A comparative case study using effective mutation potentials
V Cutello, G Narzisi, G Nicosia, M Pavone
Artificial Immune Systems: 4th International Conference, ICARIS 2005, Banff …, 2005
1652005
ExpansionHunter Denovo: a computational method for locating known and novel repeat expansions in short-read sequencing data
E Dolzhenko, MF Bennett, PA Richmond, B Trost, S Chen, JJFA van Vugt, ...
Genome biology 21, 1-14, 2020
1372020
Curated variation benchmarks for challenging medically relevant autosomal genes
J Wagner, ND Olson, L Harris, J McDaniel, H Cheng, A Fungtammasan, ...
Nature biotechnology 40 (5), 672-680, 2022
1292022
Reevaluating assembly evaluations with feature response curves: GAGE and assemblathons
F Vezzi, G Narzisi, B Mishra
PloS one 7 (12), e52210, 2012
1272012
Benchmarking challenging small variants with linked and long reads
J Wagner, ND Olson, L Harris, Z Khan, J Farek, M Mahmoud, A Stankovic, ...
Cell Genomics 2 (5), 2022
1192022
Indel variant analysis of short-read sequencing data with Scalpel
H Fang, EA Bergmann, K Arora, V Vacic, MC Zody, I Iossifov, JA O'rawe, ...
Nature protocols 11 (12), 2529-2548, 2016
1122016
Genome-wide somatic variant calling using localized colored de Bruijn graphs
G Narzisi, A Corvelo, K Arora, EA Bergmann, M Shah, R Musunuri, ...
Communications biology 1 (1), 20, 2018
1022018
Performance assessment of DNA sequencing platforms in the ABRF Next-Generation Sequencing Study
J Foox, SW Tighe, CM Nicolet, JM Zook, M Byrska-Bishop, WE Clarke, ...
Nature biotechnology 39 (9), 1129-1140, 2021
842021
Feature-by-feature–evaluating de novo sequence assembly
F Vezzi, G Narzisi, B Mishra
PloS one 7 (2), e31002, 2012
812012
Multi-objective evolutionary optimization of agent-based models: An application to emergency response planning.
G Narzisi, V Mysore, B Mishra
Computational Intelligence 2006, 224-230, 2006
772006
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Articles 1–20