| Imperfect vaccination can enhance the transmission of highly virulent pathogens AF Read, SJ Baigent, C Powers, LB Kgosana, L Blackwell, LP Smith, ... PLoS biology 13 (7), e1002198, 2015 | 402 | 2015 |
| Why does drug resistance readily evolve but vaccine resistance does not? DA Kennedy, AF Read Proceedings of the Royal Society B: Biological Sciences 284 (1851), 20162562, 2017 | 167 | 2017 |
| Potential drivers of virulence evolution in aquaculture DA Kennedy, G Kurath, IL Brito, MK Purcell, AF Read, JR Winton, ... Evolutionary Applications 9 (2), 344-354, 2016 | 118 | 2016 |
| Why the evolution of vaccine resistance is less of a concern than the evolution of drug resistance DA Kennedy, AF Read Proceedings of the National Academy of Sciences 115 (51), 12878-12886, 2018 | 103 | 2018 |
| The evolution of courtship behaviors through the origination of a new gene in Drosophila H Dai, Y Chen, S Chen, Q Mao, D Kennedy, P Landback, A Eyre-Walker, ... Proceedings of the National Academy of Sciences 105 (21), 7478-7483, 2008 | 85 | 2008 |
| Industry-wide surveillance of Marek's disease virus on commercial poultry farms DA Kennedy, C Cairns, MJ Jones, AS Bell, RM Salathé, SJ Baigent, ... Avian diseases 61 (2), 153-164, 2017 | 60 | 2017 |
| Monitor for COVID-19 vaccine resistance evolution during clinical trials DA Kennedy, AF Read PLoS Biology 18 (11), e3001000, 2020 | 56 | 2020 |
| Diversity and relationships of bradyrhizobia from legumes native to eastern North America MA Parker, DA Kennedy Canadian journal of microbiology 52 (12), 1148-1157, 2006 | 54 | 2006 |
| What the reproductive number R0 can and cannot tell us about COVID-19 dynamics CL Shaw, DA Kennedy Theoretical Population Biology 137, 2-9, 2021 | 35 | 2021 |
| Using quantitative disease dynamics as a tool for guiding response to avian influenza in poultry in the United States of America KM Pepin, E Spackman, JD Brown, KL Pabilonia, LP Garber, JT Weaver, ... Preventive Veterinary Medicine 113 (4), 376-397, 2014 | 28 | 2014 |
| Ahead of the curve: next generation estimators of drug resistance in malaria infections N Mideo, DA Kennedy, JM Carlton, JA Bailey, JJ Juliano, AF Read Trends in parasitology 29 (7), 321-328, 2013 | 28 | 2013 |
| Effects of multiple sources of genetic drift on pathogen variation within hosts DA Kennedy, G Dwyer PLoS Biology 16 (3), e2004444, 2018 | 27 | 2018 |
| Modeling Marek's disease virus transmission: A framework for evaluating the impact of farming practices and evolution DA Kennedy, PA Dunn, AF Read Epidemics 23, 85-95, 2018 | 22 | 2018 |
| Pathogen growth in insect hosts: inferring the importance of different mechanisms using stochastic models and response-time data DA Kennedy, V Dukic, G Dwyer The American Naturalist 184 (3), 407-423, 2014 | 22 | 2014 |
| An observational study of the temporal and spatial patterns of Marek's-disease-associated leukosis condemnation of young chickens in the United States of America DA Kennedy, JR Dunn, PA Dunn, AF Read Preventive veterinary medicine 120 (3-4), 328-335, 2015 | 19 | 2015 |
| Combining principal component analysis with parameter line-searches to improve the efficacy of Metropolis–Hastings MCMC DA Kennedy, V Dukic, G Dwyer Environmental and ecological statistics 22, 247-274, 2015 | 19 | 2015 |
| Pathogen evolution during vaccination campaigns T Day, DA Kennedy, AF Read, S Gandon PLoS biology 20 (9), e3001804, 2022 | 17* | 2022 |
| The Effect of Immunodeficiency on the Evolution of Virulence: An Experimental Test with the Rodent Malaria Plasmodium chabaudi VC Barclay, DA Kennedy, VC Weaver, D Sim, JO Lloyd-Smith, AF Read The American Naturalist 184 (S1), S47-S57, 2014 | 17 | 2014 |
| DNA from dust: comparative genomics of large DNA viruses in field surveillance samples U Pandey, AS Bell, DW Renner, DA Kennedy, JT Shreve, CL Cairns, ... Msphere 1 (5), 10.1128/msphere. 00132-16, 2016 | 13 | 2016 |
| Molecular epidemiology of Marek’s disease virus in central Pennsylvania, USA AS Bell, DA Kennedy, MJ Jones, CL Cairns, U Pandey, PA Dunn, ... Virus Evolution 5 (1), vey042, 2019 | 9 | 2019 |
