Konstantin Okonechnikov
Konstantin Okonechnikov
Подтвержден адрес электронной почты в домене dkfz.de - Главная страница
НазваниеПроцитированоГод
Unipro UGENE: a unified bioinformatics toolkit
K Okonechnikov, O Golosova, M Fursov, Ugene Team
Bioinformatics 28 (8), 1166-1167, 2012
8282012
Qualimap: evaluating next generation sequencing alignment data
F García-Alcalde, K Okonechnikov, J Carbonell, LM Ruiz, S Götz, ...
Bioinformatics, 2012
3272012
Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data
K Okonechnikov, A Conesa, F García-Alcalde
Bioinformatics 32 (2), 292-294, 2015
2652015
DNA methylation-based classification and grading system for meningioma: a multicentre, retrospective analysis
F Sahm, D Schrimpf, D Stichel, DTW Jones, T Hielscher, S Schefzyk, ...
The lancet oncology 18 (5), 682-694, 2017
1332017
UGENE team. 2012
K Okonechnikov, O Golosova, M Fursov
Unipro UGENE: a unified bioinformatics toolkit. Bioinformatics 28 (8), 1166-1167, 2012
732012
Therapeutic targeting of ependymoma as informed by oncogenic enhancer profiling
SC Mack, KW Pajtler, L Chavez, K Okonechnikov, KC Bertrand, X Wang, ...
Nature 553 (7686), 101, 2018
462018
Aberrant ERBB4-SRC signaling as a hallmark of group 4 medulloblastoma revealed by integrative phosphoproteomic profiling
A Forget, L Martignetti, S Puget, L Calzone, S Brabetz, D Picard, ...
Cancer cell 34 (3), 379-395. e7, 2018
122018
A mechanistic classification of clinical phenotypes in neuroblastoma
S Ackermann, M Cartolano, B Hero, A Welte, Y Kahlert, A Roderwieser, ...
Science 362 (6419), 1165-1170, 2018
92018
InFusion: advancing discovery of fusion genes and chimeric transcripts from deep RNA-sequencing data
K Okonechnikov, A Imai-Matsushima, L Paul, A Seitz, TF Meyer, ...
PloS one 11 (12), e0167417, 2016
92016
Genetic characterization of an adapted pandemic 2009 H1N1 influenza virus that reveals improved replication rates in human lung epithelial cells
X Wörmann, M Lesch, RW Welke, K Okonechnikov, M Abdurishid, ...
Virology 492, 118-129, 2016
52016
InTAD: chromosome conformation guided analysis of enhancer target genes
K Okonechnikov, S Erkek, JO Korbel, SM Pfister, L Chavez
BMC bioinformatics 20 (1), 60, 2019
12019
MYC drives Group 3 medulloblastoma through transformation of Sox2+ astrocyte progenitor cells
R Tao, N Murad, Z Xu, P Zhang, K Okonechnikov, M Kool, ...
Cancer research 79 (8), 1967-1980, 2019
12019
MYCN amplification drives an aggressive form of spinal ependymoma
DR Ghasemi, M Sill, K Okonechnikov, A Korshunov, S Yip, PW Schutz, ...
Acta neuropathologica, 1-15, 2019
2019
Desmoplastic/nodular medulloblastomas (DNMB) and medulloblastomas with extensive nodularity (MBEN) disclose similar epigenetic signatures but different transcriptional profiles
A Korshunov, F Sahm, K Okonechnikov, M Ryzhova, D Stichel, ...
Acta neuropathologica 137 (6), 1003-1015, 2019
2019
Mapping the single cell transcriptome reveals the cellular composition of ATRT subgroups
A Buellesbach, PD Johann, K Lappalainen, K Okonechnikov, DTW Jones, ...
Klinische Pädiatrie 231 (03), 33, 2019
2019
Molecular progression of SHH-activated medulloblastomas
A Korshunov, K Okonechnikov, F Sahm, M Ryzhova, D Stichel, P Sievers, ...
Acta neuropathologica, 1-4, 2019
2019
CHROMOSOME CONFORMATION ANALYSIS OF EPENDYMOMA IDENTIFIES PUTATIVE TUMOR DEPENDENCY GENES ACTIVATED BY DISTAL ONCOGENIC ENHANCERS
K Okonechnikov, JM Huebner, K Kraft, RA Hidalgo, R Bump, S Chandran, ...
NEURO-ONCOLOGY 21, 80-81, 2019
2019
LOSS OF THE TRANSCRIPTIONAL CO-REPRESSOR BCOR LEADS TO OVEREXPRESSION OF THE GROWTH FACTOR IGF2 AND SHH MEDULLOBLASTOMA TUMOR FORMATION
L Kutscher, N Batora, K Okonechnikov, J Clark, M Vouri, S van Rijn, ...
NEURO-ONCOLOGY 21, 107-107, 2019
2019
OVEREXPRESSION OF MYC ALONE IS SUFFICIENT TO INITIATE GROUP 3 MEDULLOBLASTOMA
R Tao, N Murad, Z Xu, P Zhang, K Okonechnikov, M Kool, ...
NEURO-ONCOLOGY 20, 206-206, 2018
2018
EPEN-24. YAP1 FUSION PROTEINS MEDIATE ONCOGENIC ACTIVITY IN EPENDYMOMA VIA INTERACTION WITH TEAD TRANSCRIPTION FACTORS
KW Pajtler, K Okonechnikov, M Vouri, S Brabetz, DTW Jones, ...
Neuro-Oncology 20 (suppl_2), i78-i78, 2018
2018
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