Konstantin Okonechnikov
Konstantin Okonechnikov
Подтвержден адрес электронной почты в домене dkfz.de - Главная страница
Название
Процитировано
Процитировано
Год
Unipro UGENE: a unified bioinformatics toolkit
K Okonechnikov, O Golosova, M Fursov, Ugene Team
Bioinformatics 28 (8), 1166-1167, 2012
11832012
Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data
K Okonechnikov, A Conesa, F García-Alcalde
Bioinformatics 32 (2), 292-294, 2016
4442016
Qualimap: evaluating next generation sequencing alignment data
F García-Alcalde, K Okonechnikov, J Carbonell, LM Ruiz, S Götz, ...
Bioinformatics, 2012
4322012
DNA methylation-based classification and grading system for meningioma: a multicentre, retrospective analysis
F Sahm, D Schrimpf, D Stichel, DTW Jones, T Hielscher, S Schefzyk, ...
The lancet oncology 18 (5), 682-694, 2017
2272017
UGENE team. 2012
K Okonechnikov, O Golosova, M Fursov
Unipro UGENE: a unified bioinformatics toolkit. Bioinformatics 28 (8), 1166-1167, 2012
882012
Therapeutic targeting of ependymoma as informed by oncogenic enhancer profiling
SC Mack, KW Pajtler, L Chavez, K Okonechnikov, KC Bertrand, X Wang, ...
Nature 553 (7686), 101-105, 2018
742018
A mechanistic classification of clinical phenotypes in neuroblastoma
S Ackermann, M Cartolano, B Hero, A Welte, Y Kahlert, A Roderwieser, ...
Science 362 (6419), 1165-1170, 2018
472018
Aberrant ERBB4-SRC signaling as a hallmark of group 4 medulloblastoma revealed by integrative phosphoproteomic profiling
A Forget, L Martignetti, S Puget, L Calzone, S Brabetz, D Picard, ...
Cancer cell 34 (3), 379-395. e7, 2018
322018
InFusion: advancing discovery of fusion genes and chimeric transcripts from deep RNA-sequencing data
K Okonechnikov, A Imai-Matsushima, L Paul, A Seitz, TF Meyer, ...
PLoS One 11 (12), e0167417, 2016
182016
MYCN amplification drives an aggressive form of spinal ependymoma
DR Ghasemi, M Sill, K Okonechnikov, A Korshunov, S Yip, PW Schutz, ...
Acta neuropathologica 138 (6), 1075-1089, 2019
82019
InTAD: chromosome conformation guided analysis of enhancer target genes
K Okonechnikov, S Erkek, JO Korbel, SM Pfister, L Chavez
BMC bioinformatics 20 (1), 60, 2019
52019
Genetic characterization of an adapted pandemic 2009 H1N1 influenza virus that reveals improved replication rates in human lung epithelial cells
X Wörmann, M Lesch, RW Welke, K Okonechnikov, M Abdurishid, ...
Virology 492, 118-129, 2016
52016
YAP1 subgroup supratentorial ependymoma requires TEAD and nuclear factor I-mediated transcriptional programmes for tumorigenesis
KW Pajtler, Y Wei, K Okonechnikov, PBG Silva, M Vouri, L Zhang, ...
Nature communications 10 (1), 1-16, 2019
42019
Desmoplastic/nodular medulloblastomas (DNMB) and medulloblastomas with extensive nodularity (MBEN) disclose similar epigenetic signatures but different transcriptional profiles
A Korshunov, F Sahm, K Okonechnikov, M Ryzhova, D Stichel, ...
Acta neuropathologica 137 (6), 1003-1015, 2019
32019
MYC drives Group 3 medulloblastoma through transformation of Sox2+ astrocyte progenitor cells
R Tao, N Murad, Z Xu, P Zhang, K Okonechnikov, M Kool, ...
Cancer research 79 (8), 1967-1980, 2019
32019
Notch1 switches progenitor competence in inducing medulloblastoma
C Ballabio, M Gianesello, C Lago, K Okonechnikov, M Anderle, G Aiello, ...
bioRxiv, 2020
12020
EPEN-24. YAP1 FUSION PROTEINS MEDIATE ONCOGENIC ACTIVITY IN EPENDYMOMA VIA INTERACTION WITH TEAD TRANSCRIPTION FACTORS
KW Pajtler, K Okonechnikov, M Vouri, S Brabetz, DTW Jones, ...
Neuro-oncology 20 (suppl_2), i78-i78, 2018
12018
Abstract B71: Molecular heterogeneity and novel oncogenic fusions in RELA-and YAP1-negative supratentorial ependymoma
DR Ghasemi, K Okonechnikov, A Korshunov, M Sill, T Zheng, ...
Cancer Research 80 (14 Supplement), B71-B71, 2020
2020
Single nucleus RNA-sequencing reveals intratumoral heterogeneity in medulloblastoma with extensive nodularity (MBEN)
DR Ghasemi, K Okonechnikov, JP Mallm, K Lappalainen, K Bauer, ...
NEUROPATHOLOGY AND APPLIED NEUROBIOLOGY 46, 17-18, 2020
2020
Transcriptional profiling of medulloblastoma with extensive nodularity (MBEN) reveals two clinically relevant tumor subsets with VSNL1 as potent prognostic marker
A Korshunov, K Okonechnikov, F Sahm, M Ryzhova, D Stichel, ...
Acta neuropathologica 139 (3), 583-596, 2020
2020
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