A human gut microbial gene catalogue established by metagenomic sequencing J Qin, R Li, J Raes, M Arumugam, KS Burgdorf, C Manichanh, T Nielsen, ... nature 464 (7285), 59-65, 2010 | 13459 | 2010 |
Enterotypes of the human gut microbiome M Arumugam, J Raes, E Pelletier, D Le Paslier, T Yamada, DR Mende, ... nature 473 (7346), 174-180, 2011 | 8477 | 2011 |
Richness of human gut microbiome correlates with metabolic markers E Le Chatelier, T Nielsen, J Qin, E Prifti, F Hildebrand, G Falony, ... Nature 500 (7464), 541-546, 2013 | 4896 | 2013 |
Reduced diversity of faecal microbiota in Crohn’s disease revealed by a metagenomic approach C Manichanh, L Rigottier-Gois, E Bonnaud, K Gloux, E Pelletier, ... Gut 55 (2), 205-211, 2006 | 2747 | 2006 |
An integrated catalog of reference genes in the human gut microbiome J Li, H Jia, X Cai, H Zhong, Q Feng, S Sunagawa, M Arumugam, ... Nature biotechnology 32 (8), 834-841, 2014 | 2133 | 2014 |
The gut microbiota in IBD C Manichanh, N Borruel, F Casellas, F Guarner Nature reviews Gastroenterology & hepatology 9 (10), 599-608, 2012 | 1416 | 2012 |
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes HB Nielsen, M Almeida, AS Juncker, S Rasmussen, J Li, S Sunagawa, ... Nature biotechnology 32 (8), 822-828, 2014 | 1126 | 2014 |
A microbial signature for Crohn's disease V Pascal, M Pozuelo, N Borruel, F Casellas, D Campos, A Santiago, ... Gut 66 (5), 813-822, 2017 | 817 | 2017 |
Towards standards for human fecal sample processing in metagenomic studies PI Costea, G Zeller, S Sunagawa, E Pelletier, A Alberti, F Levenez, ... Nature biotechnology 35 (11), 1069-1076, 2017 | 769 | 2017 |
Short-term effect of antibiotics on human gut microbiota S Panda, I El Khader, F Casellas, J Lopez Vivancos, M Garcia Cors, ... PloS one 9 (4), e95476, 2014 | 415 | 2014 |
Intestinal microbiota and diet in IBS: causes, consequences, or epiphenomena? M Rajilic-Stojanovic, DM Jonkers, A Salonen, K Hanevik, J Raes, ... Official journal of the American College of Gastroenterology| ACG 110 (2 …, 2015 | 413 | 2015 |
Reshaping the gut microbiome with bacterial transplantation and antibiotic intake C Manichanh, J Reeder, P Gibert, E Varela, M Llopis, M Antolin, R Guigo, ... Genome research 20 (10), 1411-1419, 2010 | 400 | 2010 |
Reduction of butyrate-and methane-producing microorganisms in patients with Irritable Bowel Syndrome M Pozuelo, S Panda, A Santiago, S Mendez, A Accarino, J Santos, ... Scientific reports 5 (1), 12693, 2015 | 365 | 2015 |
Colonisation by Faecalibacterium prausnitzii and maintenance of clinical remission in patients with ulcerative colitis E Varela, C Manichanh, M Gallart, A Torrejón, N Borruel, F Casellas, ... Alimentary pharmacology & therapeutics 38 (2), 151-161, 2013 | 302 | 2013 |
Storage conditions of intestinal microbiota matter in metagenomic analysis S Cardona, A Eck, M Cassellas, M Gallart, C Alastrue, J Dore, F Azpiroz, ... BMC microbiology 12, 1-8, 2012 | 301 | 2012 |
The impact of the Fungus-Host-Microbiota interplay upon Candida albicans infections: current knowledge and new perspectives C d'Enfert, AK Kaune, LR Alaban, S Chakraborty, N Cole, M Delavy, ... FEMS microbiology reviews 45 (3), fuaa060, 2021 | 262 | 2021 |
The microbiome in respiratory medicine: current challenges and future perspectives R Faner, O Sibila, A Agustí, E Bernasconi, JD Chalmers, GB Huffnagle, ... European Respiratory Journal 49 (4), 2017 | 258 | 2017 |
The role of bacteria in onset and perpetuation of inflammatory bowel disease P Seksik, H Sokol, P Lepage, N Vasquez, C Manichanh, I Mangin, ... Alimentary pharmacology & therapeutics 24, 11-18, 2006 | 234 | 2006 |
The gut microbiota predispose to the pathophysiology of acute postradiotherapy diarrhea C Manichanh, E Varela, C Martinez, M Antolin, M Llopis, J Doré, J Giralt, ... Official journal of the American College of Gastroenterology| ACG 103 (7 …, 2008 | 200 | 2008 |
Development of a real-time polymerase chain reaction assay for the diagnosis of human herpesvirus-6 infection and application to bone marrow transplant patients A Gautheret-Dejean, C Manichanh, F Thien-Ah-Koon, AM Fillet, ... Journal of virological methods 100 (1-2), 27-35, 2002 | 176 | 2002 |