|Integrated genomic characterization reveals novel, therapeutically relevant drug targets in FGFR and EGFR pathways in sporadic intrahepatic cholangiocarcinoma|
MJ Borad, MD Champion, JB Egan, WS Liang, R Fonseca, AH Bryce, ...
PLoS Genet 10 (2), e1004135, 2014
|MicroRNA‐328 is associated with (non‐small) cell lung cancer (NSCLC) brain metastasis and mediates NSCLC migration|
S Arora, AR Ranade, NL Tran, S Nasser, S Sridhar, RL Korn, JTD Ross, ...
International journal of cancer 129 (11), 2621-2631, 2011
|Integrated genomic and epigenomic analysis of breast cancer brain metastasis|
B Salhia, J Kiefer, JTD Ross, R Metapally, RA Martinez, KN Johnson, ...
PloS one 9 (1), e85448, 2014
|Genomic view of bipolar disorder revealed by whole genome sequencing in a genetic isolate|
B Georgi, D Craig, RL Kember, W Liu, I Lindquist, S Nasser, C Brown, ...
PLoS Genet 10 (3), e1004229, 2014
|Integrated genomic analyses reveal frequent TERT aberrations in acral melanoma|
WS Liang, W Hendricks, J Kiefer, J Schmidt, S Sekar, J Carpten, ...
Genome research 27 (4), 524-532, 2017
|miRNA expression profiling in migrating glioblastoma cells: regulation of cell migration and invasion by miR-23b via targeting of Pyk2|
JC Loftus, JTD Ross, KM Paquette, VM Paulino, S Nasser, Z Yang, ...
PloS one 7 (6), e39818, 2012
|A modified fuzzy k-means clustering using expectation maximization|
S Nasser, R Alkhaldi, G Vert
2006 IEEE International Conference on Fuzzy Systems, 231-235, 2006
|Comparison of analysis tools for miRNA high throughput sequencing using nerve crush as a model|
RPR Metpally, S Nasser, I Malenica, A Courtright, E Carlson, L Ghaffari, ...
Frontiers in genetics 4, 20, 2013
|A pilot precision medicine trial for children with diffuse intrinsic pontine glioma—PNOC003: A report from the Pacific Pediatric Neuro‐Oncology Consortium|
S Mueller, P Jain, WS Liang, L Kilburn, C Kline, N Gupta, E Panditharatna, ...
International journal of cancer 145 (7), 1889-1901, 2019
|Prospective feasibility trial for genomics-informed treatment in recurrent and progressive glioblastoma|
SA Byron, NL Tran, RF Halperin, JJ Phillips, JG Kuhn, JF De Groot, ...
Clinical Cancer Research 24 (2), 295-305, 2018
|A somatic reference standard for cancer genome sequencing|
DW Craig, S Nasser, R Corbett, SK Chan, L Murray, C Legendre, ...
Scientific reports 6 (1), 1-11, 2016
|Multiple sequence alignment using fuzzy logic|
S Nasser, GL Vert, M Nicolescu, A Murray
2007 IEEE Symposium on Computational Intelligence and Bioinformatics and …, 2007
|Simultaneous characterization of somatic events and HPV-18 integration in a metastatic cervical carcinoma patient using DNA and RNA sequencing|
WS Liang, J Aldrich, S Nasser, A Kurdoglu, L Phillips, R Reiman, ...
International Journal of Gynecologic Cancer 24 (2), 2014
|An integrated framework for reporting clinically relevant biomarkers from paired tumor/normal genomic and transcriptomic sequencing data in support of clinical trials in …|
S Nasser, AA Kurdolgu, T Izatt, J Aldrich, ML Russell, A Christoforides, ...
Pacific Symposium on Biocomputing Co-Chairs, 56-67, 2014
|Clinical implementation of integrated genomic profiling in patients with advanced cancers|
MJ Borad, JB Egan, RM Condjella, WS Liang, R Fonseca, NR Ritacca, ...
Scientific reports 6 (1), 1-12, 2016
|A fuzzy classifier to taxonomically group DNA fragments within a metagenome|
S Nasser, A Breland, FC Harris, M Nicolescu
NAFIPS 2008-2008 Annual Meeting of the North American Fuzzy Information …, 2008
|Identifying miRNA and imaging features associated with metastasis of lung cancer to the brain|
S Nasser, AR Ranade, S Sridhart, L Haney, RL Korn, MB Gotway, ...
2009 IEEE International Conference on Bioinformatics and Biomedicine, 246-251, 2009
|Scalable generation of mesenchymal stem cells and adipocytes from human pluripotent stem cells|
M Karam, I Younis, NR Elareer, S Nasser, EM Abdelalim
Cells 9 (3), 710, 2020
|Multiscale, multimodal analysis of tumor heterogeneity in IDH1 mutant vs wild-type diffuse gliomas|
ME Berens, A Sood, JS Barnholtz-Sloan, JF Graf, S Cho, S Kim, J Kiefer, ...
PloS one 14 (12), e0219724, 2019
|A systematic approach toward gene annotation of the hallmarks of cancer|
J Kiefer, S Nasser, J Graf, C Kodira, F Ginty, L Newberg, A Sood, ...
Cancer Research 77 (13 Supplement), 3589-3589, 2017