Aaron Dinner
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CHARMM: the biomolecular simulation program
BR Brooks, CL Brooks III, AD Mackerell Jr, L Nilsson, RJ Petrella, B Roux, ...
Journal of computational chemistry 30 (10), 1545-1614, 2009
Effects of diurnal variation of gut microbes and high-fat feeding on host circadian clock function and metabolism
V Leone, SM Gibbons, K Martinez, AL Hutchison, EY Huang, CM Cham, ...
Cell host & microbe 17 (5), 681-689, 2015
Multilineage transcriptional priming and determination of alternate hematopoietic cell fates
P Laslo, CJ Spooner, A Warmflash, DW Lancki, HJ Lee, R Sciammas, ...
Cell 126 (4), 755-766, 2006
Understanding protein folding via free-energy surfaces from theory and experiment
AR Dinner, A Šali, LJ Smith, CM Dobson, M Karplus
Trends in biochemical sciences 25 (7), 331-339, 2000
The immunological synapse balances T cell receptor signaling and degradation
KH Lee, AR Dinner, C Tu, G Campi, S Raychaudhuri, R Varma, TN Sims, ...
science 302 (5648), 1218-1222, 2003
Transcriptional regulation of germinal center B and plasma cell fates by dynamical control of IRF4
K Ochiai, M Maienschein-Cline, G Simonetti, J Chen, R Rosenthal, ...
Immunity 38 (5), 918-929, 2013
Automatic method for identifying reaction coordinates in complex systems
A Ma, AR Dinner
The Journal of Physical Chemistry B 109 (14), 6769-6779, 2005
Understanding β-hairpin formation
AR Dinner, T Lazaridis, M Karplus
Proceedings of the National Academy of Sciences 96 (16), 9068-9073, 1999
Intracellular transport of insulin granules is a subordinated random walk
SMA Tabei, S Burov, HY Kim, A Kuznetsov, T Huynh, J Jureller, ...
Proceedings of the National Academy of Sciences 110 (13), 4911-4916, 2013
Pancreatic β cell enhancers regulate rhythmic transcription of genes controlling insulin secretion
M Perelis, B Marcheva, K Moynihan Ramsey, MJ Schipma, AL Hutchison, ...
Science 350 (6261), aac4250, 2015
Micelle formation and the hydrophobic effect
L Maibaum, AR Dinner, D Chandler
The Journal of Physical Chemistry B 108 (21), 6778-6781, 2004
CD4 enhances T cell sensitivity to antigen by coordinating Lck accumulation at the immunological synapse
QJ Li, AR Dinner, S Qi, DJ Irvine, JB Huppa, MM Davis, AK Chakraborty
Nature immunology 5 (8), 791-799, 2004
Uracil-DNA glycosylase acts by substrate autocatalysis
AR Dinner, GM Blackburn, M Karplus
Nature 413 (6857), 752-755, 2001
Scaling laws governing stochastic growth and division of single bacterial cells
S Iyer-Biswas, CS Wright, JT Henry, K Lo, S Burov, Y Lin, GE Crooks, ...
Proceedings of the National Academy of Sciences 111 (45), 15912-15917, 2014
A conserved bicycle model for circadian clock control of membrane excitability
M Flourakis, E Kula-Eversole, AL Hutchison, TH Han, K Aranda, ...
Cell 162 (4), 836-848, 2015
Epigenetic repression of the Igk locus by STAT5-mediated recruitment of the histone methyltransferase Ezh2
M Mandal, SE Powers, M Maienschein-Cline, ET Bartom, KM Hamel, ...
Nature immunology 12 (12), 1212-1220, 2011
Introduction to quantum information and computation for chemistry
S Kais
Quantum Information and Computation for Chemistry, 1-38, 2014
The theory of ultra-coarse-graining. 1. General principles
JF Dama, AV Sinitskiy, M McCullagh, J Weare, B Roux, AR Dinner, ...
Journal of chemical theory and computation 9 (5), 2466-2480, 2013
Polymerization of MIP‐1 chemokine (CCL3 and CCL4) and clearance of MIP‐1 by insulin‐degrading enzyme
M Ren, Q Guo, L Guo, M Lenz, F Qian, RR Koenen, H Xu, AB Schilling, ...
The EMBO journal 29 (23), 3952-3966, 2010
A self-reinforcing regulatory network triggered by limiting IL-7 activates pre-BCR signaling and differentiation
K Ochiai, M Maienschein-Cline, M Mandal, JR Triggs, E Bertolino, ...
Nature immunology 13 (3), 300-307, 2012
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