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Charlotta Scharfe
Charlotta Scharfe
Other namesCharlotta Fruechtenicht, Charlotta Schaerfe
Principal Data Scientist, F. Hoffmann-La Roche, Switzerland
Verified email at roche.com
Title
Cited by
Cited by
Year
Mutation effects predicted from sequence co-variation
TA Hopf, JB Ingraham, FJ Poelwijk, CPI Schärfe, M Springer, C Sander, ...
Nature biotechnology 35 (2), 128-135, 2017
6562017
Sequence co-evolution gives 3D contacts and structures of protein complexes
TA Hopf, CPI Schärfe, JP Rodrigues, AG Green, O Kohlbacher, C Sander, ...
elife 3, e03430, 2014
5352014
The EVcouplings Python framework for coevolutionary sequence analysis
TA Hopf, AG Green, B Schubert, S Mersmann, CPI Schärfe, JB Ingraham, ...
Bioinformatics 35 (9), 1582-1584, 2019
2312019
Genetic variation in human drug-related genes
CPI Schärfe, R Tremmel, M Schwab, O Kohlbacher, DS Marks
Genome medicine 9, 1-15, 2017
1332017
The MoSGrid science gateway–a complete solution for molecular simulations
J Krüger, R Grunzke, S Gesing, S Breuers, A Brinkmann, L de la Garza, ...
Journal of Chemical Theory and Computation 10 (6), 2232-2245, 2014
872014
Activation of lymphoma-associated MyD88 mutations via allostery-induced TIR-domain oligomerization
M Avbelj, OO Wolz, O Fekonja, M Benčina, M Repič, J Mavri, J Krüger, ...
Blood, The Journal of the American Society of Hematology 124 (26), 3896-3904, 2014
862014
Structural and functional characterization of the bacterial type III secretion export apparatus
T Dietsche, M Tesfazgi Mebrhatu, MJ Brunner, P Abrusci, J Yan, ...
PLoS pathogens 12 (12), e1006071, 2016
842016
Structure and sequence analyses of clustered protocadherins reveal antiparallel interactions that mediate homophilic specificity
JM Nicoludis, SY Lau, CPI Schärfe, DS Marks, WA Weihofen, R Gaudet
Structure 23 (11), 2087-2098, 2015
812015
Antiparallel protocadherin homodimers use distinct affinity-and specificity-mediating regions in cadherin repeats 1-4
JM Nicoludis, BE Vogt, AG Green, CPI Schärfe, DS Marks, R Gaudet
Elife 5, e18449, 2016
632016
Standards‐based metadata management for molecular simulations
R Grunzke, S Breuers, S Gesing, S Herres‐Pawlis, M Kruse, D Blunk, ...
Concurrency and Computation: Practice and Experience 26 (10), 1744-1759, 2014
362014
Open community challenge reveals molecular network modules with key roles in diseases
S Choobdar, ME Ahsen, J Crawford, M Tomasoni, T Fang, D Lamparter, ...
bioRxiv, 265553, 2018
282018
Population-specific design of de-immunized protein biotherapeutics
B Schubert, C Schärfe, P Dönnes, T Hopf, D Marks, O Kohlbacher
PLoS computational biology 14 (3), e1005983, 2018
242018
Sequence co-evolution gives 3D contacts and structures of protein complexes. eLife 3
TA Hopf, CPI Schärfe, J Rodrigues, AG Green, O Kohlbacher, C Sander, ...
eLife Sciences Publications Limited 3, e03430, 2014
182014
From the Desktop to the Grid: conversion of KNIME Workflows to gUSE.
L de la Garza, J Krüger, C Schärfe, M Röttig, S Aiche, K Reinert, ...
IWSG, 2013
142013
Structure, dynamics and implied gating mechanism of a human cyclic nucleotide-gated channel
Y Gofman, C Schärfe, DS Marks, T Haliloglu, N Ben-Tal
PLoS Computational Biology 10 (12), e1003976, 2014
122014
Ballaxy: web services for structural bioinformatics
AK Hildebrandt, D Stöckel, NM Fischer, L de la Garza, J Krüger, S Nickels, ...
Bioinformatics 31 (1), 121-122, 2015
102015
ClinVAP: a reporting strategy from variants to therapeutic options
B Sürün, CPI Schärfe, MR Divine, J Heinrich, NC Toussaint, ...
Bioinformatics 36 (7), 2316-2317, 2020
52020
Molecular epidemiology as an effective tool for the diagnosis and control of PRRSV infections in pig farms, illustrated using five cases.
T Frey, A Richter, J Skrypski, C Schaerfe, M Hoferer
22017
Research Collection
B Sürün, CPI Schärfe, MR Divine, J Heinrich, NC Toussaint
Bioinformatics 36 (7), 2316-2317, 2020
2020
Towards personalized medicine: computational approaches to support drug design and clinical decision making
CPI Schärfe
Universität Tübingen, 2019
2019
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Articles 1–20