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Samantha Lycett
Samantha Lycett
Roslin Institiute, University of Edinburgh
Verified email at ed.ac.uk - Homepage
Title
Cited by
Cited by
Year
Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic
GJD Smith, D Vijaykrishna, J Bahl, SJ Lycett, M Worobey, OG Pybus, ...
Nature 459 (7250), 1122-1125, 2009
27982009
Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity
EC Thomson, LE Rosen, JG Shepherd, R Spreafico, A da Silva Filipe, ...
Cell 184 (5), 1171-1187. e20, 2021
5652021
The genesis and source of the H7N9 influenza viruses causing human infections in China
TTY Lam, J Wang, Y Shen, B Zhou, L Duan, CL Cheung, C Ma, SJ Lycett, ...
Nature 502 (7470), 241-244, 2013
5232013
Fast dating using least-squares criteria and algorithms
TH To, M Jung, S Lycett, O Gascuel
Systematic biology 65 (1), 82-97, 2016
3902016
Automated analysis of phylogenetic clusters
M Ragonnet-Cronin, E Hodcroft, S Hué, E Fearnhill, V Delpech, ...
BMC bioinformatics 14, 1-10, 2013
3502013
Role for migratory wild birds in the global spread of avian influenza H5N8
Global Consortium for H5N8 and Related Influenza Viruses
Science 354 (6309), 213-217, 2016
3122016
Transmission network parameters estimated from HIV sequences for a nationwide epidemic
AJ Leigh Brown, SJ Lycett, L Weinert, GJ Hughes, E Fearnhill, DT Dunn
Journal of Infectious Diseases 204 (9), 1463-1469, 2011
2272011
A brief history of bird flu
SJ Lycett, F Duchatel, P Digard
Philosophical Transactions of the Royal Society B 374 (1775), 20180257, 2019
2182019
Molecular phylodynamics of the heterosexual HIV epidemic in the United Kingdom
GJ Hughes, E Fearnhill, D Dunn, SJ Lycett, A Rambaut, AJ Leigh Brown, ...
PLoS pathogens 5 (9), e1000590, 2009
2022009
Gene exchange drives the ecological success of a multi-host bacterial pathogen
EJ Richardson, R Bacigalupe, EM Harrison, LA Weinert, S Lycett, ...
Nature ecology & evolution 2 (9), 1468-1478, 2018
1962018
Monitoring SARS-CoV-2 circulation and diversity through community wastewater sequencing, the Netherlands and Belgium
R Izquierdo-Lara, G Elsinga, L Heijnen, BBO Munnink, ...
Emerging infectious diseases 27 (5), 1405, 2021
1872021
Time resolved study of self‐assembled InAs quantum dots
H Yu, S Lycett, C Roberts, R Murray
Applied Physics Letters 69 (26), 4087-4089, 1996
1811996
Supersize me: how whole-genome sequencing and big data are transforming epidemiology
RR Kao, DT Haydon, SJ Lycett, PR Murcia
Trends in microbiology 22 (5), 282-291, 2014
1542014
The circulating SARS-CoV-2 spike variant N439K maintains fitness while evading antibody-mediated immunity
EC Thomson, LE Rosen, JG Shepherd, R Spreafico, A da Silva Filipe, ...
BioRxiv, 2020.11. 04.355842, 2020
1072020
Reassortment between influenza B lineages and the emergence of a coadapted PB1–PB2–HA gene complex
G Dudas, T Bedford, S Lycett, A Rambaut
Molecular biology and evolution 32 (1), 162-172, 2015
1002015
Reassortment patterns of avian influenza virus internal segments among different subtypes
L Lu, SJ Lycett, AJ Leigh Brown
BMC evolutionary biology 14, 1-15, 2014
1002014
Adaptation, spread and transmission of SARS-CoV-2 in farmed minks and associated humans in the Netherlands
L Lu, RS Sikkema, FC Velkers, DF Nieuwenhuijse, EAJ Fischer, PA Meijer, ...
Nature communications 12 (1), 6802, 2021
982021
The short stalk length of highly pathogenic avian influenza H5N1 virus neuraminidase limits transmission of pandemic H1N1 virus in ferrets
D Blumenkrantz, KL Roberts, H Shelton, S Lycett, WS Barclay
Journal of virology 87 (19), 10539-10551, 2013
972013
Assessing the epidemic potential of RNA and DNA viruses
MEJ Woolhouse, L Brierley, C McCaffery, S Lycett
Emerging infectious diseases 22 (12), 2037, 2016
922016
Genesis and spread of multiple reassortants during the 2016/2017 H5 avian influenza epidemic in Eurasia
SJ Lycett, A Pohlmann, C Staubach, V Caliendo, M Woolhouse, M Beer, ...
Proceedings of the National Academy of Sciences 117 (34), 20814-20825, 2020
892020
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