| eggNOG-mapper v2: Functional Annotation, Orthology Assignments, and Domain Prediction at the Metagenomic Scale CP Cantalapiedra, A Hernández-Plaza, I Letunic, P Bork, J Huerta-Cepas Molecular Biology and Evolution 38 (12), 5825-5829, 2021 | 2256 | 2021 |
| Profiling cellular diversity in sponges informs animal cell type and nervous system evolution JM Musser, KJ Schippers, M Nickel, G Mizzon, AB Kohn, C Pape, ... Science 374 (6568), 717-723, 2021 | 191 | 2021 |
| Towards the biogeography of prokaryotic genes LP Coelho, R Alves, ÁR Del Río, PN Myers, CP Cantalapiedra, ... Nature 601 (7892), 252-256, 2022 | 132 | 2022 |
| eggNOG 6.0: enabling comparative genomics across 12 535 organisms A Hernández-Plaza, D Szklarczyk, J Botas, CP Cantalapiedra, ... Nucleic Acids Research 51 (D1), D389-D394, 2023 | 129 | 2023 |
| BARLEYMAP: physical and genetic mapping of nucleotide sequences and annotation of surrounding loci in barley CP Cantalapiedra, R Boudiar, AM Casas, E Igartua, B Contreras-Moreira Molecular breeding 35, 1-11, 2015 | 110 | 2015 |
| Analysis of plant pan-genomes and transcriptomes with GET_HOMOLOGUES-EST, a clustering solution for sequences of the same species B Contreras-Moreira, CP Cantalapiedra, MJ García-Pereira, SP Gordon, ... Frontiers in plant science 8, 184, 2017 | 94 | 2017 |
| Comparative plastome genomics and phylogenomics of Brachypodium: flowering time signatures, introgression and recombination in recently diverged ecotypes R Sancho, CP Cantalapiedra, D López‐Alvarez, SP Gordon, JP Vogel, ... New Phytologist 218 (4), 1631-1644, 2018 | 91 | 2018 |
| Large differences in gene expression responses to drought and heat stress between elite barley cultivar Scarlett and a Spanish landrace CP Cantalapiedra, MJ García-Pereira, MP Gracia, E Igartua, AM Casas, ... Frontiers in plant science 8, 647, 2017 | 64 | 2017 |
| Functional and evolutionary significance of unknown genes from uncultivated taxa AR del Rio, J Giner-Lamia, CP Cantalapiedra, J Botas, Z Deng, ... bioRxiv 2022.01.26.477801, 2022 | 42* | 2022 |
| Harnessing novel diversity from landraces to improve an elite barley variety A Monteagudo, AM Casas, CP Cantalapiedra, B Contreras-Moreira, ... Frontiers in Plant Science 10, 434, 2019 | 37 | 2019 |
| Genetic association with high‐resolution climate data reveals selection footprints in the genomes of barley landraces across the Iberian Peninsula B Contreras‐Moreira, R Serrano‐Notivoli, NE Mohammed, ... Molecular ecology 28 (8), 1994-2012, 2019 | 27 | 2019 |
| Identification of quantitative trait loci for agronomic traits contributed by a barley (Hordeum vulgare) Mediterranean landrace R Boudiar, AM Casas, CP Cantalapiedra, MP Gracia, E Igartua Crop and Pasture Science 67 (1), 37-46, 2016 | 17 | 2016 |
| RSAT:: Plants: motif discovery within clusters of upstream sequences in plant genomes B Contreras-Moreira, JA Castro-Mondragon, C Rioualen, ... Plant Synthetic Promoters: Methods and Protocols, 279-295, 2016 | 15 | 2016 |
| A Cluster of Nucleotide‐Binding Site–Leucine‐Rich Repeat Genes Resides in a Barley Powdery Mildew Resistance Quantitative Trait Loci on 7HL CP Cantalapiedra, B Contreras‐Moreira, C Silvar, D Perovic, F Ordon, ... The plant genome 9 (2), plantgenome2015.10.0101, 2016 | 14 | 2016 |
| Resequencing theVrs1 gene in Spanish barley landraces revealed reversion of six-rowed to two-rowed spike AM Casas, B Contreras-Moreira, CP Cantalapiedra, S Sakuma, ... Molecular Breeding 38, 1-12, 2018 | 13 | 2018 |
| Selection footprints in barley breeding lines detected by combining genotyping-by-sequencing with reference genome information E Igartua, E Mansour, CP Cantalapiedra, B Contreras-Moreira, MP Gracia, ... Molecular breeding 35, 1-14, 2015 | 10 | 2015 |
| Candidate genes underlying QTL for flowering time and their interactions in a wide spring barley (Hordeum vulgare L.) cross AM Casas, CR Gazulla, A Monteagudo, CP Cantalapiedra, M Moralejo, ... The Crop Journal 9 (4), 862-872, 2021 | 8 | 2021 |
| PhyloCloud: an online platform for making sense of phylogenomic data Z Deng, J Botas, CP Cantalapiedra, A Hernández-Plaza, ... Nucleic acids research 50 (W1), W577-W582, 2022 | 6 | 2022 |
| Advances in breeding techniques for cereal crops W Zhang, X Cai, M Haas, M Mascher, M Sanchez-Garcia, AR Bentley, ... Burleigh Dodds Science Publishing, 2019 | 6 | 2019 |
| Genome-wide association studies (GWAS) in barley E Igartua, CP Cantalapiedra, AM Casas Advances in breeding techniques for cereal crops, 503-536, 2019 | 5 | 2019 |
Jaime Huerta-CepasGroup Leader at CBGP (UPM-INIA-CSIC), Madrid, SpainVerified email at embl.de
