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Alexey Sergushichev
Alexey Sergushichev
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Title
Cited by
Cited by
Year
Fast gene set enrichment analysis
G Korotkevich, V Sukhov, N Budin, B Shpak, MN Artyomov, ...
BioRxiv, 060012, 2016
2539*2016
Network integration of parallel metabolic and transcriptional data reveals metabolic modules that regulate macrophage polarization
AK Jha, SCC Huang, A Sergushichev, V Lampropoulou, Y Ivanova, ...
Immunity 42 (3), 419-430, 2015
16782015
Itaconate links inhibition of succinate dehydrogenase with macrophage metabolic remodeling and regulation of inflammation
V Lampropoulou, A Sergushichev, M Bambouskova, S Nair, EE Vincent, ...
Cell metabolism 24 (1), 158-166, 2016
11332016
TREM2 maintains microglial metabolic fitness in Alzheimer’s disease
TK Ulland, WM Song, SCC Huang, JD Ulrich, A Sergushichev, WL Beatty, ...
Cell 170 (4), 649-663. e13, 2017
9022017
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ...
Gigascience 2 (1), 2047-217X-2-10, 2013
7922013
Electrophilic properties of itaconate and derivatives regulate the IκBζ–ATF3 inflammatory axis
M Bambouskova, L Gorvel, V Lampropoulou, A Sergushichev, ...
Nature 556 (7702), 501-504, 2018
5142018
Mitochondrial phosphoenolpyruvate carboxykinase regulates metabolic adaptation and enables glucose-independent tumor growth
EE Vincent, A Sergushichev, T Griss, MC Gingras, B Samborska, ...
Molecular cell 60 (2), 195-207, 2015
2622015
Integrating immunometabolism and macrophage diversity
MN Artyomov, A Sergushichev, JD Schilling
Seminars in immunology 28 (5), 417-424, 2016
1582016
Homeostatic control of innate lung inflammation by Vici syndrome gene Epg5 and additional autophagy genes promotes influenza pathogenesis
Q Lu, CC Yokoyama, JW Williams, MT Baldridge, X Jin, B DesRochers, ...
Cell host & microbe 19 (1), 102-113, 2016
992016
GAM: a web-service for integrated transcriptional and metabolic network analysis
AA Sergushichev, AA Loboda, AK Jha, EE Vincent, EM Driggers, ...
Nucleic acids research 44 (W1), W194-W200, 2016
952016
Mycobacterium tuberculosis carrying a rifampicin drug resistance mutation reprograms macrophage metabolism through cell wall lipid changes
NC Howard, ND Marin, M Ahmed, BA Rosa, J Martin, M Bambouskova, ...
Nature microbiology 3 (10), 1099-1108, 2018
912018
End Sequence Analysis Toolkit (ESAT) expands the extractable information from single-cell RNA-seq data
A Derr, C Yang, R Zilionis, A Sergushichev, DM Blodgett, S Redick, ...
Genome research 26 (10), 1397-1410, 2016
712016
The miR-17∼ 92 microRNA cluster is a global regulator of tumor metabolism
S Izreig, B Samborska, RM Johnson, A Sergushichev, EH Ma, C Lussier, ...
Cell reports 16 (7), 1915-1928, 2016
702016
De novo mutations in FLNC leading to early‐onset restrictive cardiomyopathy and congenital myopathy
A Kiselev, R Vaz, A Knyazeva, A Khudiakov, S Tarnovskaya, J Liu, ...
Human mutation 39 (9), 1161-1172, 2018
582018
Targeted next-generation sequencing (NGS) of nine candidate genes with custom AmpliSeq in patients and a cardiomyopathy risk group
AS Glotov, SV Kazakov, EA Zhukova, AV Alexandrov, OS Glotov, ...
Clinica Chimica Acta 446, 132-140, 2015
462015
LKB1 expressed in dendritic cells governs the development and expansion of thymus-derived regulatory T cells
LR Pelgrom, TA Patente, A Sergushichev, E Esaulova, F Otto, ...
Cell research 29 (5), 406-419, 2019
422019
Non-canonical glutamine transamination sustains efferocytosis by coupling redox buffering to oxidative phosphorylation
J Merlin, S Ivanov, A Dumont, A Sergushichev, J Gall, M Stunault, ...
Nature metabolism 3 (10), 1313-1326, 2021
352021
Solving generalized maximum-weight connected subgraph problem for network enrichment analysis
AA Loboda, MN Artyomov, AA Sergushichev
Algorithms in Bioinformatics: 16th International Workshop, WABI 2016, Aarhus …, 2016
312016
ImmGen at 15
SV Aguilar, O Aguilar, R Allan, V Angeli, MN Artyomov, N Asinovski, ...
Nature immunology 21 (7), 700-703, 2020
242020
Tonic TCR signaling inversely regulates the basal metabolism of CD4+ T cells
AAV Milam, JM Bartleson, MD Buck, CH Chang, A Sergushichev, ...
ImmunoHorizons 4 (8), 485-497, 2020
212020
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Articles 1–20