| Genetic effects on gene expression across human tissues GTEx Consortium Lead analysts: Aguet François 1 Brown Andrew A. 2 3 4 Castel ... Nature 550 (7675), 204-213, 2017 | 2992 | 2017 |
| The GTEx Consortium atlas of genetic regulatory effects across human tissues GTEx Consortium Science 369 (6509), 1318-1330, 2020 | 1907 | 2020 |
| The impact of sex on gene expression across human tissues M Oliva, M Muñoz-Aguirre, S Kim-Hellmuth, V Wucher, ADH Gewirtz, ... Science 369 (6509), eaba3066, 2020 | 533 | 2020 |
| Dynamic landscape and regulation of RNA editing in mammals MH Tan, Q Li, R Shanmugam, R Piskol, J Kohler, AN Young, KI Liu, ... Nature 550 (7675), 249-254, 2017 | 487 | 2017 |
| Intratumoral CD4+ T cells mediate anti-tumor cytotoxicity in human bladder cancer DY Oh, SS Kwek, SS Raju, T Li, E McCarthy, E Chow, D Aran, A Ilano, ... Cell 181 (7), 1612-1625. e13, 2020 | 397 | 2020 |
| Estimation of alternative splicing isoform frequencies from RNA-Seq data M Nicolae, S Mangul, I Măndoiu, A Zelikovsky Algorithms in Bioinformatics, 202-214, 2010 | 250 | 2010 |
| Determinants of telomere length across human tissues K Demanelis, F Jasmine, LS Chen, M Chernoff, L Tong, D Delgado, ... Science 369 (6509), eaaz6876, 2020 | 244 | 2020 |
| A quantitative proteome map of the human body L Jiang, M Wang, S Lin, R Jian, X Li, J Chan, G Dong, H Fang, ... Cell 183 (1), 269-283. e19, 2020 | 222 | 2020 |
| Whole-genome sequencing reveals host factors underlying critical COVID-19 A Kousathanas, E Pairo-Castineira, K Rawlik, A Stuckey, CA Odhams, ... Nature 607 (7917), 97-103, 2022 | 166 | 2022 |
| Co-expression networks reveal the tissue-specific regulation of transcription and splicing A Saha, Y Kim, ADH Gewirtz, B Jo, C Gao, IC McDowell, BE Engelhardt, ... Genome research 27 (11), 1843-1858, 2017 | 157 | 2017 |
| Exploiting the GTEx resources to decipher the mechanisms at GWAS loci AN Barbeira, R Bonazzola, ER Gamazon, Y Liang, YS Park, ... Genome biology 22 (1), 1-24, 2021 | 150 | 2021 |
| Inferring viral quasispecies spectra from 454 pyrose-quencing reads I Astrovskaya, B Tork, S Mangul, K Westbrooks, I Măndoiu, P Balfe, ... BMC Bioinformatics 12 (Suppl 6), S1, 2011 | 147 | 2011 |
| Critical assessment of metagenome interpretation: the second round of challenges F Meyer, A Fritz, ZL Deng, D Koslicki, TR Lesker, A Gurevich, G Robertson, ... Nature methods 19 (4), 429-440, 2022 | 128 | 2022 |
| Systematic benchmarking of omics computational tools S Mangul, LS Martin, BL Hill, AKM Lam, MG Distler, A Zelikovsky, E Eskin, ... Nature communications 10 (1), 1393, 2019 | 119 | 2019 |
| Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia LM Olde Loohuis, S Mangul, APS Ori, G Jospin, D Koslicki, HT Yang, ... Translational psychiatry 8 (1), 96, 2018 | 99* | 2018 |
| Transcriptomic signatures across human tissues identify functional rare genetic variation NM Ferraro, BJ Strober, J Einson, NS Abell, F Aguet, AN Barbeira, ... Science 369 (6509), eaaz5900, 2020 | 98 | 2020 |
| Population-scale tissue transcriptomics maps long non-coding RNAs to complex disease OM de Goede, DC Nachun, NM Ferraro, MJ Gloudemans, AS Rao, ... Cell 184 (10), 2633-2648. e19, 2021 | 83 | 2021 |
| PhenomeXcan: Mapping the genome to the phenome through the transcriptome M Pividori, PS Rajagopal, A Barbeira, Y Liang, O Melia, L Bastarache, ... Science advances 6 (37), eaba2083, 2020 | 82 | 2020 |
| Technology dictates algorithms: recent developments in read alignment M Alser, J Rotman, D Deshpande, K Taraszka, H Shi, PI Baykal, HT Yang, ... Genome biology 22 (1), 249, 2021 | 76 | 2021 |
| Challenges and recommendations to improve the installability and archival stability of omics computational tools S Mangul, T Mosqueiro, RJ Abdill, D Duong, K Mitchell, V Sarwal, B Hill, ... PLoS biology 17 (6), e3000333, 2019 | 74* | 2019 |
Alexander ZelikovskyDistinguished University Professor at Georgia State UniversityVerified email at gsu.edu
