| Initial sequencing and comparative analysis of the mouse genome European Bioinformatics Institute: Birney Ewan 3 Goldman Nick 3 Kasprzyk ... Nature 420 (6915), 520-562, 2002 | 8170 | 2002 |
| The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray) GA Tuskan, S Difazio, S Jansson, J Bohlmann, I Grigoriev, U Hellsten, ... science 313 (5793), 1596-1604, 2006 | 4650 | 2006 |
| The Sorghum bicolor genome and the diversification of grasses AH Paterson, JE Bowers, R Bruggmann, I Dubchak, J Grimwood, ... Nature 457 (7229), 551-556, 2009 | 3078 | 2009 |
| The Chlamydomonas genome reveals the evolution of key animal and plant functions SS Merchant, SE Prochnik, O Vallon, EH Harris, SJ Karpowicz, ... Science 318 (5848), 245-250, 2007 | 2768 | 2007 |
| Genome sequence of the Brown Norway rat yields insights into mammalian evolution University of Utah Weiss Robert B. 14 Dunn Diane M. 14, ... Nature 428 (6982), 493-521, 2004 | 2442 | 2004 |
| VISTA: computational tools for comparative genomics KA Frazer, L Pachter, A Poliakov, EM Rubin, I Dubchak Nucleic acids research 32 (suppl_2), W273-W279, 2004 | 2109 | 2004 |
| The amphioxus genome and the evolution of the chordate karyotype NH Putnam, T Butts, DEK Ferrier, RF Furlong, U Hellsten, T Kawashima, ... Nature 453 (7198), 1064-1071, 2008 | 1629 | 2008 |
| In vivo enhancer analysis of human conserved non-coding sequences LA Pennacchio, N Ahituv, AM Moses, S Prabhakar, MA Nobrega, ... Nature 444 (7118), 499-502, 2006 | 1266 | 2006 |
| Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis BM Tyler, S Tripathy, X Zhang, P Dehal, RHY Jiang, A Aerts, ... Science 313 (5791), 1261-1266, 2006 | 1170 | 2006 |
| MycoCosm portal: gearing up for 1000 fungal genomes IV Grigoriev, R Nikitin, S Haridas, A Kuo, R Ohm, R Otillar, R Riley, ... Nucleic acids research 42 (D1), D699-D704, 2014 | 1136 | 2014 |
| Multi-class protein fold recognition using support vector machines and neural networks CHQ Ding, I Dubchak Bioinformatics 17 (4), 349-358, 2001 | 1132 | 2001 |
| VISTA: visualizing global DNA sequence alignments of arbitrary length C Mayor, M Brudno, JR Schwartz, A Poliakov, EM Rubin, KA Frazer, ... Bioinformatics 16 (11), 1046-1047, 2000 | 1088 | 2000 |
| VISTA Enhancer Browser—a database of tissue-specific human enhancers A Visel, S Minovitsky, I Dubchak, LA Pennacchio Nucleic acids research 35 (suppl_1), D88-D92, 2007 | 1071 | 2007 |
| Genomic variation in 3,010 diverse accessions of Asian cultivated rice W Wang, R Mauleon, Z Hu, D Chebotarov, S Tai, Z Wu, M Li, T Zheng, ... Nature 557 (7703), 43-49, 2018 | 913 | 2018 |
| The genome of the Western clawed frog Xenopus tropicalis U Hellsten, RM Harland, MJ Gilchrist, D Hendrix, J Jurka, V Kapitonov, ... Science 328 (5978), 633-636, 2010 | 836 | 2010 |
| The genome of Eucalyptus grandis AA Myburg, D Grattapaglia, GA Tuskan, U Hellsten, RD Hayes, ... Nature 510 (7505), 356-362, 2014 | 783 | 2014 |
| KBase: the United States department of energy systems biology knowledgebase AP Arkin, RW Cottingham, CS Henry, NL Harris, RL Stevens, S Maslov, ... Nature biotechnology 36 (7), 566-569, 2018 | 735 | 2018 |
| Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas AZ Worden, JH Lee, T Mock, P Rouzé, MP Simmons, AL Aerts, AE Allen, ... Science 324 (5924), 268-272, 2009 | 683 | 2009 |
| The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation B Palenik, J Grimwood, A Aerts, P Rouzé, A Salamov, N Putnam, ... Proceedings of the National Academy of Sciences 104 (18), 7705-7710, 2007 | 674 | 2007 |
| AVID: A global alignment program N Bray, I Dubchak, L Pachter Genome research 13 (1), 97-102, 2003 | 643 | 2003 |
