| PhyloFisher: a phylogenomic package for resolving eukaryotic relationships AK Tice, D Žihala, T Pánek, RE Jones, ED Salomaki, S Nenarokov, ... PLoS Biology 19 (8), e3001365, 2021 | 62 | 2021 |
| Genomics of new ciliate lineages provides insight into the evolution of obligate anaerobiosis J Rotterová, E Salomaki, T Pánek, W Bourland, D Žihala, P Táborský, ... Current Biology 30 (11), 2037-2050. e6, 2020 | 60 | 2020 |
| The oxymonad genome displays canonical eukaryotic complexity in the absence of a mitochondrion A Karnkowska, SC Treitli, O Brzoň, L Novák, V Vacek, P Soukal, ... Molecular biology and evolution 36 (10), 2292-2312, 2019 | 51 | 2019 |
| Comparative genomics of Leishmania (Mundinia) A Butenko, AY Kostygov, J Sádlová, Y Kleschenko, T Bečvář, ... BMC genomics 20, 1-12, 2019 | 40 | 2019 |
| Nuclear genetic codes with a different meaning of the UAG and the UAA codon T Pánek, D Žihala, M Sokol, R Derelle, V Klimeš, M Hradilová, ... BMC biology 15, 1-18, 2017 | 38 | 2017 |
| Limited efficacy of daratumumab in multiple myeloma with extramedullary disease T Jelinek, T Sevcikova, D Zihala, T Popkova, V Kapustova, ... Leukemia 36 (1), 288-291, 2022 | 35 | 2022 |
| More than 2% of circulating tumor plasma cells defines plasma cell leukemia–like multiple myeloma T Jelinek, R Bezdekova, D Zihala, T Sevcikova, A Anilkumar Sithara, ... Journal of Clinical Oncology 41 (7), 1383-1392, 2023 | 34 | 2023 |
| Evolution and unprecedented variants of the mitochondrial genetic code in a lineage of green algae D Žihala, M Eliáš Genome biology and evolution 11 (10), 2992-3007, 2019 | 20 | 2019 |
| Circulating tumor and immune cells for minimally invasive risk stratification of smoldering multiple myeloma R Termini, D Žihala, E Terpos, A Perez-Montaña, T Jelínek, M Raab, ... Clinical Cancer Research 28 (21), 4771-4781, 2022 | 19 | 2022 |
| The deubiquitinase OTUD1 regulates immunoglobulin production and proteasome inhibitor sensitivity in multiple myeloma A Vdovin, T Jelinek, D Zihala, T Sevcikova, M Durech, H Sahinbegovic, ... Nature Communications 13 (1), 6820, 2022 | 13 | 2022 |
| Transcriptome analysis of diffuse large b-cell lymphoma cells inducibly expressing MyD88 L265P mutation identifies upregulated CD44, LGALS3, NFKBIZ, and BATF as downstream … M Turi, A Anilkumar Sithara, L Hofmanová, D Žihala, D Radhakrishnan, ... International Journal of Molecular Sciences 24 (6), 5623, 2023 | 9 | 2023 |
| Insight into the mechanism of CD34+ cell mobilisation impairment in multiple myeloma patients treated with anti‐CD38 therapy O Venglar, V Kapustova, A Anilkumar Sithara, D Zihala, L Muronova, ... British Journal of Haematology 204 (4), 1439-1449, 2024 | 6 | 2024 |
| Deubiquitinase OTUD1 resolves stalled translation on polyA and rare codon rich mRNAs R Snaurova, A Vdovin, M Durech, J Nezval, D Zihala, T Jelinek, R Hajek, ... Molecular and Cellular Biology 42 (12), e00265-22, 2022 | 6 | 2022 |
| Evidence for an independent hydrogenosome-to-mitosome transition in the CL3 lineage of fornicates R Vargová, P Hanousková, J Salamonová, D Žihala, JD Silberman, ... Frontiers in microbiology 13, 866459, 2022 | 6 | 2022 |
| Beyond the marrow: insights from comprehensive next-generation sequencing of extramedullary multiple myeloma tumors T Jelinek, D Zihala, T Sevcikova, A Anilkumar Sithara, V Kapustova, ... Leukemia, 1-11, 2024 | 4 | 2024 |
| Mutation landscape of multiple myeloma measurable residual disease: identification of targets for precision medicine M Zátopková, T Ševčíková, V Fanfani, Z Chyra, L Říhová, R Bezděková, ... Blood Advances 6 (2), 368-372, 2022 | 4 | 2022 |
| Evolution of the genetic code in the mitochondria of Labyrinthulea (Stramenopiles) D Žihala, J Salamonová, M Eliáš Molecular phylogenetics and evolution 152, 106908, 2020 | 4 | 2020 |
| Create, Analyze, and Visualize Phylogenomic Datasets Using PhyloFisher RE Jones, AK Tice, M Eliáš, L Eme, M Kolísko, S Nenarokov, T Pánek, ... Current Protocols 4 (1), e969, 2024 | 3 | 2024 |
| Deubiquitinase BAP1 is crucial for surface expression of T cell receptor (TCR) complex, T cell-B cell conjugate formation, and T cell activation D Radhakrishnan, J Kotulová, L Hofmanová, AA Sithara, M Turi, D Žihala, ... Journal of Leukocyte Biology, qiae184, 2024 | | 2024 |
| Spatial transcriptomics reveals profound subclonal heterogeneity and T-cell dysfunction in extramedullary myeloma M John, M Helal, J Duell, G Mattavelli, E Stanojkovska, N Afrin, ... Blood Journal, blood. 2024024590, 2024 | | 2024 |
Michal SimicekPostdoctoral Researcher, MRC LMB CambridgeVerified email at mrc-lmb.cam.ac.uk
