|Integration of external signaling pathways with the core transcriptional network in embryonic stem cells|
X Chen, H Xu, P Yuan, F Fang, M Huss, VB Vega, E Wong, YL Orlov, ...
Cell 133 (6), 1106-1117, 2008
|An oestrogen-receptor-alpha-bound human chromatin interactome|
MJ Fullwood, MH Liu, YF Pan, J Liu, H Xu, YB Mohamed, YL Orlov, ...
Nature 462 (7269), 58-64, 2009
|Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation|
G Li, X Ruan, RK Auerbach, KS Sandhu, M Zheng, P Wang, HM Poh, ...
Cell 148 (1), 84-98, 2012
|Whole-genome mapping of histone H3 Lys4 and 27 trimethylations reveals distinct genomic compartments in human embryonic stem cells|
XD Zhao, X Han, JL Chew, J Liu, KP Chiu, A Choo, YL Orlov, WK Sung, ...
Cell stem cell 1 (3), 286-298, 2007
|Global mapping of c-Myc binding sites and target gene networks in human B cells|
KI Zeller, XD Zhao, CWH Lee, KP Chiu, F Yao, JT Yustein, HS Ooi, ...
Proceedings of the National Academy of Sciences 103 (47), 17834-17839, 2006
|The nuclear receptor Nr5a2 can replace Oct4 in the reprogramming of murine somatic cells to pluripotent cells|
JCD Heng, B Feng, J Han, J Jiang, P Kraus, JH Ng, YL Orlov, M Huss, ...
Cell stem cell 6 (2), 167-174, 2010
|A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity|
NY Chia, YS Chan, B Feng, X Lu, YL Orlov, D Moreau, P Kumar, L Yang, ...
Nature 468 (7321), 316-320, 2010
|Tbx3 improves the germ-line competency of induced pluripotent stem cells|
J Han, P Yuan, H Yang, J Zhang, BS Soh, P Li, SL Lim, S Cao, J Tay, ...
Nature 463 (7284), 1096-1100, 2010
|Eset partners with Oct4 to restrict extraembryonic trophoblast lineage potential in embryonic stem cells|
P Yuan, J Han, G Guo, YL Orlov, M Huss, YH Loh, LP Yaw, P Robson, ...
Genes & development 23 (21), 2507-2520, 2009
|Integrative model of genomic factors for determining binding site selection by estrogen receptor-α|
R Joseph, YL Orlov, M Huss, W Sun, SL Kong, L Ukil, YF Pan, G Li, M Lim, ...
Molecular systems biology 6 (1), 2010
|Non-coding RNAs and their roles in stress response in plants|
J Wang, X Meng, OB Dobrovolskaya, YL Orlov, M Chen
Genomics, proteomics & bioinformatics 15 (5), 301-312, 2017
|FRIZZY PANICLE drives supernumerary spikelets in bread wheat|
O Dobrovolskaya, C Pont, R Sibout, P Martinek, E Badaeva, F Murat, ...
Plant physiology 167 (1), 189-199, 2015
|Complexity: an internet resource for analysis of DNA sequence complexity|
YL Orlov, VN Potapov
Nucleic acids research 32 (suppl 2), W628-W633, 2004
|Graded Nodal/Activin signaling titrates conversion of quantitative phospho-Smad2 levels into qualitative embryonic stem cell fate decisions|
KL Lee, SK Lim, YL Orlov, H Yang, LT Ang, L Poellinger, B Lim
PLoS Genet 7 (6), e1002130, 2011
|Integrative analysis of the human cis-antisense gene pairs, miRNAs and their transcription regulation patterns|
OV Grinchuk, P Jenjaroenpun, YL Orlov, J Zhou, VA Kuznetsov
Nucleic acids research 38 (2), 534-547, 2010
|Repeats, longevity and the sources of mtDNA deletions: evidence from ‘deletional spectra’|
X Guo, KY Popadin, N Markuzon, YL Orlov, Y Kraytsberg, KJ Krishnan, ...
Trends in Genetics 26 (8), 340-343, 2010
|Transcription factors for the modulation of pluripotency and reprogramming|
JCD Heng, YL Orlov, HH Ng
Cold Spring Harbor symposia on quantitative biology 75, 237-244, 2010
|Computational errors and biases in short read next generation sequencing|
I Abnizova, R te Boekhorst, Y Orlov
J Proteomics Bioinform 10 (1), 1-17, 2017
|Dysfunction in ribosomal gene expression in the hypothalamus and hippocampus following chronic social defeat stress in male mice as revealed by RNA-seq|
DA Smagin, IL Kovalenko, AG Galyamina, AO Bragin, YL Orlov, ...
Neural Plasticity, 1-15, 2015
|Quality assessment of the Affymetrix U133A&B probesets by target sequence mapping and expression data analysis|
YL Orlov, J Zhou, L Lipovich, A Shahab, VA Kuznetsov
In silico biology 7 (3), 241-260, 2007