Katherine St. John

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Nina AmentaProfessor of Computer Science, University of California at DavisVerified email at cs.ucdavis.edu
Tandy WarnowGrainger Distinguished Chair in Engineering, UIUCVerified email at illinois.edu
F. James RohlfDepartment of Anthropology and Department of Ecology & Evolution, Stony Brook UniversityVerified email at stonybrook.edu
William Harcourt-SmithCUNY (Lehman College and Graduate Center) and American Museum of Natural HistoryVerified email at amnh.org
Luay NakhlehProfessor of Computer Science, Rice UniversityVerified email at rice.edu
Bernard M.E. MoretISCB Fellow, Professor emeritus, Computer & Communication Sciences, EPFLVerified email at epfl.ch
Eric DelsonAmerican Museum of Natural History and Lehman College-CUNY(Emeritus)Verified email at lehman.cuny.edu
Simone LinzAssociate Professor, School of Computer Science, University of Auckland, New ZealandVerified email at auckland.ac.nz
Charles SempleProfessor of Mathematics, University of CanterburyVerified email at canterbury.ac.nz
Maria Luisa BonetLSI, UPCVerified email at lsi.upc.edu
Usman RoshanAssociate Professor, Department of Computer Science, New Jersey Institute of TechnologyVerified email at njit.edu
Megan OwenLehman College, City University of New YorkVerified email at lehman.cuny.edu
Magnus BordewichProfessor of Computer Science, Durham UniversityVerified email at durham.ac.uk
Tracy A. HeathAssociate Professor, Iowa State UniversityVerified email at iastate.edu
David M. HillisProfessor of Integrative Biology, University of Texas at AustinVerified email at austin.utexas.edu
C. Randal LinderUniversity of Texas at AustinVerified email at austin.utexas.edu
dan gusfieldUniversity of California DavisVerified email at cs.ucdavis.edu
Balaji VenkatachalamGoogleVerified email at ucdavis.edu
Seth SullivantDistinguished Professor of Mathematics, North Carolina State UniversityVerified email at ncsu.edu
Lam Si Tung HoAssociate Professor, Department of Mathematics and Statistics, Dalhousie UniversityVerified email at dal.ca

Katherine St. John

City University of New York

Verified email at hunter.cuny.edu - Homepage


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Evolutionary morphing DF Wiley, N Amenta, DA Alcantara, D Ghosh, YJ Kil, E Delson, ... VIS 05. IEEE Visualization, 2005., 431-438, 2005	488	2005
Analysis and visualization of tree space DM Hillis, TA Heath, K St. John Systematic Biology 54 (3), 471-482, 2005	254	2005
Reconstructing reticulate evolution in species-theory and practice L Nakhleh, T Warnow, CR Linder, K St. John Journal of Computational Biology 12 (6), 796-811, 2005	241	2005
Performance study of phylogenetic methods:(unweighted) quartet methods and neighbor-joining K St. John, T Warnow, BME Moret, L Vawter Journal of Algorithms 48 (1), 173-193, 2003	93	2003
Absolute convergence: true trees from short sequences T Warnow, BME Moret, K St. John Proceedings of the twelfth annual ACM-SIAM symposium on Discrete algorithms …, 2001	74	2001
Designing fast converging phylogenetic methods L Nakhleh, U Roshan, K St. John, J Sun, T Warnow Bioinformatics 17 (suppl 1), S190-S198, 2001	73	2001
Review Paper: The Shape of Phylogenetic Treespace K St. John Systematic Biology, 2016	63*	2016
A reduction algorithm for computing the hybridization number of two trees M Bordewich, S Linz, K St. John, C Semple Evolutionary bioinformatics online 3, 86, 2007	63	2007
A linear-time majority tree algorithm N Amenta, F Clarke, K St. John Algorithms in Bioinformatics (Proceedings of WABI 2003), 216-227, 2003	63	2003
The accuracy of fast phylogenetic methods for large datasets L Nakhleh, BME Moret, U Roshan, K St. John, T Warnow Proc. 7th Pacific Symp. Biocomputing PSB 2002, 211-222, 2002	62	2002
Approximating subtree distances between Phylogenies ML Bonet Carbonell, K St. John, R Mahindru, N Amenta Journal of Computational Biology 13 (8), 1419-1434, 2006	59	2006
Untangling tanglegrams: Comparing trees by their drawings B Venkatachalam, J Apple, K St John, D Gusfield Computational Biology and Bioinformatics, IEEE/ACM Transactions on 7 (4 …, 2010	45	2010
Rotation distance is fixed-parameter tractable S Cleary, K St. John Information Processing Letters 109 (16), 918-922, 2009	42	2009
SequenceJuxtaposer: Fluid navigation for large-scale sequence comparison in context J Slack, K Hildebrand, T Munzner, K St. John German Conference on Bioinformatics 53, 2004	38	2004
Efficiently calculating evolutionary tree measures using SAT M Bonet, K St. John Theory and Applications of Satisfiability Testing-SAT 2009, 4-17, 2009	34	2009
A Linear-Time Approximation for Rotation Distance S Cleary, K St. John J. Graph Algorithms Appl 14 (2), 385-390, 2010	28*	2010
Approximating geodesic tree distance N Amenta, M Godwin, N Postarnakevich, K St. John Information Processing Letters 103 (2), 61-65, 2007	28	2007
Counting Trees in a Phylogenetic Network Is #P-Complete S Linz, K St. John, C Semple SIAM Journal on Computing 42 (4), 1768-1776, 2013	23	2013
On Determining if Tree-based Networks Contain Fixed Trees M Anaya, O Anipchenko-Ulaj, A Ashfaq, J Chiu, M Kaiser, MS Ohsawa, ... Bulletin of mathematical biology, 1-9, 2016	20	2016
On the complexity of uSPR distance ML Bonet, K St. John IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB) 7 …, 2010	19	2010

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